PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00400g04014.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

CAMTA

Protein Properties

Length: 982aa MW: 109446 Da PI: 6.0737

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00400g04014.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	150.7	3.5e-47	7	135	2	116
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpk.............sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhek 72 ++e + rwl++ e++ iL+n+e +++++++++p sgs++L+nr+++ryfrkDG+sw+kkkdgk+v E+he+ Peinf101Scf00400g04014.1 7 VQEgRFRWLRPAEVLFILQNYEDQQIAHHPPQKPAsslltsisscfhfSGSMFLFNRRVLRYFRKDGHSWRKKKDGKAVGEAHER 91 667799*************************97334444444444459******************************* PP CG-1 73 LKvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116 LKvg+ e+l+cyYah+e+np+f+rr+yw+L+ ++e+ivlvhy++ Peinf101Scf00400g04014.1 92 LKVGNAEALNCYYAHGENNPNFRRRIYWILDPAYEHIVLVHYRD 135 ****************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51437	71.465	3	142	IPR005559	CG-1 DNA-binding domain
SMART	SM01076	1.0E-65	6	137	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	4.0E-41	11	135	IPR005559	CG-1 DNA-binding domain
Gene3D	G3DSA:2.60.40.10	6.9E-10	411	497	IPR013783	Immunoglobulin-like fold
Pfam	PF01833	3.5E-8	413	496	IPR002909	IPT domain
SuperFamily	SSF81296	2.24E-19	413	497	IPR014756	Immunoglobulin E-set
CDD	cd00102	4.93E-6	413	497	No hit	No description
Gene3D	G3DSA:1.25.40.20	1.3E-14	611	707	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50297	13.681	612	704	IPR020683	Ankyrin repeat-containing domain
SuperFamily	SSF48403	6.53E-15	616	706	IPR020683	Ankyrin repeat-containing domain
CDD	cd00204	3.50E-13	632	704	No hit	No description
Pfam	PF12796	1.0E-6	633	705	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50088	10.179	645	677	IPR002110	Ankyrin repeat
SMART	SM00015	64	762	784	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	7.876	763	792	IPR000048	IQ motif, EF-hand binding site
SuperFamily	SSF52540	2.47E-6	813	870	IPR027417	P-loop containing nucleoside triphosphate hydrolase
SMART	SM00015	0.038	821	843	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	7.565	822	851	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	0.0034	824	842	IPR000048	IQ motif, EF-hand binding site
SMART	SM00015	0.0013	844	866	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	9.029	846	871	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	2.3E-5	847	866	IPR000048	IQ motif, EF-hand binding site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0005829	Cellular Component	cytosol
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 982 aa Download sequence Send to blast
YNINDLVQEG RFRWLRPAEV LFILQNYEDQ QIAHHPPQKP ASSLLTSISS CFHFSGSMFL 60 FNRRVLRYFR KDGHSWRKKK DGKAVGEAHE RLKVGNAEAL NCYYAHGENN PNFRRRIYWI 120 LDPAYEHIVL VHYRDITEGR QVAAFMSQSS SITPTFSLSS SFYSTQHPGF TVVGSESYQQ 180 YQNDSSPGSV EICSDAVINS NGMNVTDITG RLEGVSSSPR VEMSDALRSL KEQLSLNDDN 240 LETEVYSEIE NLDDAENLVY DDGSLVQIHD SSDNLMLQPH SGESSESQHQ LLDLDANMWK 300 EMLDRCRRFP AAESQARCIE KLDENGMLQN SSGRGPIEET EIDGWLKFGG EEALKSSFTN 360 LYQVDDFKYP ACARINTYGS TPDQYTTTFD QARIGTPFED DMSLTIAQKQ KFTIHDVSPD 420 WGYSSEATKV VIVGSFLCNP SEYTWTCMFG DIEVPVQIIK EGAIRCHAPP HLPGKVTLCV 480 TSGNRVSCSE LREFEYRVKL DDHGQNNLPE VGGACNSSEE LLLLVRLVQM LLSDKSVQKG 540 DGSESSNDIL EKSKASFDTW SQVIESLLLG TSTSTMTVDW LLQELLKDKL QQWLSSKLQA 600 KNNEMGGSLS KKEQGIIHTV AGLGLEWALH PILDAGVSVN FRDINGWTAL HWAARFGREK 660 MVASLIASGA FAGAVTDPSA QDPLGKTAAS IASSCGHKGV AGYLSEVSLT SHLSSLTIEE 720 SELSKGTADV EAENTISTIS TASAATYEDQ LSLKDTLAAV RNAAQAAARI QSAFRAHSFR 780 KRRQREAARA ATTGGDEYSV LSNNALGLSA ASKLAFRNTR DKNSAALVIQ KKYRGWKGRK 840 DFLAFRQKVV KIQAHVRGYQ VRKEYKVCWA AGILEKVVLR WRRRGVGLRG FRLEEEPIEE 900 CEDEDILKVF RKQKVDAAIN EAVSRVLSMV DSPEARQQYH RILEKYRQAK AELGVAKSET 960 GSTAHSDISN IENDDIYHSQ IL

Sequence ? help Back to Top

Protein Sequence Length: 982 aa Download sequence Send to blast

YNINDLVQEG RFRWLRPAEV LFILQNYEDQ QIAHHPPQKP ASSLLTSISS CFHFSGSMFL  60
FNRRVLRYFR KDGHSWRKKK DGKAVGEAHE RLKVGNAEAL NCYYAHGENN PNFRRRIYWI  120
LDPAYEHIVL VHYRDITEGR QVAAFMSQSS SITPTFSLSS SFYSTQHPGF TVVGSESYQQ  180
YQNDSSPGSV EICSDAVINS NGMNVTDITG RLEGVSSSPR VEMSDALRSL KEQLSLNDDN  240
LETEVYSEIE NLDDAENLVY DDGSLVQIHD SSDNLMLQPH SGESSESQHQ LLDLDANMWK  300
EMLDRCRRFP AAESQARCIE KLDENGMLQN SSGRGPIEET EIDGWLKFGG EEALKSSFTN  360
LYQVDDFKYP ACARINTYGS TPDQYTTTFD QARIGTPFED DMSLTIAQKQ KFTIHDVSPD  420
WGYSSEATKV VIVGSFLCNP SEYTWTCMFG DIEVPVQIIK EGAIRCHAPP HLPGKVTLCV  480
TSGNRVSCSE LREFEYRVKL DDHGQNNLPE VGGACNSSEE LLLLVRLVQM LLSDKSVQKG  540
DGSESSNDIL EKSKASFDTW SQVIESLLLG TSTSTMTVDW LLQELLKDKL QQWLSSKLQA  600
KNNEMGGSLS KKEQGIIHTV AGLGLEWALH PILDAGVSVN FRDINGWTAL HWAARFGREK  660
MVASLIASGA FAGAVTDPSA QDPLGKTAAS IASSCGHKGV AGYLSEVSLT SHLSSLTIEE  720
SELSKGTADV EAENTISTIS TASAATYEDQ LSLKDTLAAV RNAAQAAARI QSAFRAHSFR  780
KRRQREAARA ATTGGDEYSV LSNNALGLSA ASKLAFRNTR DKNSAALVIQ KKYRGWKGRK  840
DFLAFRQKVV KIQAHVRGYQ VRKEYKVCWA AGILEKVVLR WRRRGVGLRG FRLEEEPIEE  900
CEDEDILKVF RKQKVDAAIN EAVSRVLSMV DSPEARQQYH RILEKYRQAK AELGVAKSET  960
GSTAHSDISN IENDDIYHSQ IL

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250\|UniProtKB:Q8GSA7, ECO:0000269\|PubMed:25039701, ECO:0000305\|PubMed:11925432}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:28351986}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009592004.1	0.0	PREDICTED: calmodulin-binding transcription activator 4-like isoform X1
Refseq	XP_016507791.1	0.0	PREDICTED: calmodulin-binding transcription activator 4-like isoform X1
Swissprot	Q9FYG2	0.0	CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBL	A0A1S4D334	0.0	A0A1S4D334_TOBAC; calmodulin-binding transcription activator 4-like isoform X1
STRING	XP_009592002.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3932	20	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains

Publications ? help Back to Top
Benn G, et al. A key general stress response motif is regulated non-uniformly by CAMTA transcription factors. Plant J., 2014. 80(1): p. 82-92 [PMID:25039701] Kidokoro S, et al. Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature. Plant Cell, 2017. 29(4): p. 760-774 [PMID:28351986]