PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00415g06003.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 700aa    MW: 77622.9 Da    PI: 6.6167
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00415g06003.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix926.3e-2967151187
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                               rW++qe+ aL+++r+em+  +r+++lk+plW+evs+km++ g++rs+k+Ckek+en+ k++k++k+g+ ++   + +t+++f++l
  Peinf101Scf00415g06003.1  67 RWPRQETIALLKIRSEMDVVFRDSSLKGPLWDEVSRKMADLGYHRSAKKCKEKFENVYKYHKRTKDGRASK--ADGKTYRFFEHL 149
                               8********************************************************************96..66678******9 PP

                  trihelix  86 ea 87 
                               ea
  Peinf101Scf00415g06003.1 150 EA 151
                               85 PP
2trihelix1062.7e-33493578187
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                               rW+k ev+aLi++r++++ +++++  k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql
  Peinf101Scf00415g06003.1 493 RWPKAEVQALITLRTNLDVKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQL 576
                               8*********************************************************************8.99*********** PP

                  trihelix  86 ea 87 
                               +a
  Peinf101Scf00415g06003.1 577 DA 578
                               85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.96960124IPR017877Myb-like domain
SMARTSM007170.002164126IPR001005SANT/Myb domain
PfamPF138379.1E-1966152No hitNo description
CDDcd122036.94E-2766131No hitNo description
PROSITE profilePS500907.584486550IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.1E-4487549IPR009057Homeodomain-like
SMARTSM007170.0016490552IPR001005SANT/Myb domain
CDDcd122035.72E-30492557No hitNo description
PfamPF138375.4E-23493579No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    Send to blast
MLGVTGIISS TNTSGDGATG ENQESGGGGG AAASGGSSEV AAHNNIMSSS GGFNITEEGE  60
RNSGGNRWPR QETIALLKIR SEMDVVFRDS SLKGPLWDEV SRKMADLGYH RSAKKCKEKF  120
ENVYKYHKRT KDGRASKADG KTYRFFEHLE ALENNPSSHS LLLPPSNSSR TPPPPLEATP  180
INMAMPMQST NAAINVQQVP PSVQGTNVTV SSTPPNNPFA TSQNTTTSHH QNVIHHIPPL  240
SSAMVQPSSQ PSPQPANPIQ NPQVNTSLPS HHNVSMSYST SSSTSSDEDI QRRHKKKRKW  300
KDYFERLMKD VIDKQEELQR SFLETLEKRE RDRLVREEAW RVQEIARMNK EHDLLLQERS  360
MAAAKDAAVI AFLQKVSEQQ NIQIPNNISI TPPPPSAQVH VQLPENPQAA PITHSSQQQQ  420
QNQTQQGTVT VSSAPPQPVQ APAAVSLPIT IPAPIPAQLL SQPLPPPITV KNVEASKSDN  480
GGESYTPGAS PSRWPKAEVQ ALITLRTNLD VKYQENGPKG PLWEEISAGM RKLGYNRNAK  540
RCKEKWENIN KYFKKVKESN KKRPEDSKTC PYFHQLDALY REKTKNESSS STSFNPSASG  600
FALNQAENIM APIMARPEQQ WPLPPHHQQQ QHHDTRMDHD HDHDHDHGST DNMDEDEEED  660
EEEEEDEENA YEIVTNKQQS SMTAANTITS TTTTTATTTV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290297QRRHKKKR
2290298QRRHKKKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618661.10.0PREDICTED: trihelix transcription factor GTL1-like
TrEMBLA0A1S3XDN40.0A0A1S3XDN4_TOBAC; trihelix transcription factor GTL1-like
STRINGXP_009618661.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24022459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-73Trihelix family protein