PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00423g15008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 488aa    MW: 52907.9 Da    PI: 6.1372
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00423g15008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.2e-31251309259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Peinf101Scf00423g15008.1 251 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 309
                               699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.787245311IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.9E-31247311IPR003657WRKY domain
SuperFamilySSF1182904.05E-26249311IPR003657WRKY domain
SMARTSM007741.4E-37250310IPR003657WRKY domain
PfamPF031061.1E-25252309IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MENNYQGDLA DIFRGSSTTT GAISGGNNNT TATTCGESSS VAGGAGAGAI STDGWQFPSH  60
PINYSSSGIE EPSIQDFGDP FCNLKDPLFH DLDMMQSTSS LFSSNEESNN NNNNNNDGNT  120
FFGPKILGEE IKRRSNTGNI FSRMLQISPT AKLAMSPCNS PMAAACSSPN VTLNHPASSV  180
VAAGGAVLLA NETIMSPNSS KTCLMEQNSG LQISSPRNTG IKRRKSQAKK VVCIPAPAPV  240
NSRQGGEVVP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCSARKQVER SRTDPNMLVI  300
TYTSEHNHPW PTQRNALAGS TRSQPNSKGT STPKNNITSS SQSQKYSPTN SSFKEDDQKD  360
SNIIDNNTSV TQVNIPTYPK VKEEVAELED HIDHHQLVEM HDVEFSQGIQ DTYQPTLPDS  420
SSNHSHEDFF ADLVELEADP LNLLFAKTLS GDADQGQRNK PIGSFNLYDW SGNNTKDSST  480
SNNNNNKQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-25225312280Disease resistance protein RRS1
5w3x_D2e-25225312280Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754415e-52HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009622546.10.0PREDICTED: probable WRKY transcription factor 14
RefseqXP_016470815.10.0PREDICTED: probable WRKY transcription factor 14
TrEMBLA0A1S4A2I60.0A0A1S4A2I6_TOBAC; probable WRKY transcription factor 14
STRINGXP_009622546.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67012433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-82WRKY DNA-binding protein 35