PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00426g03001.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Trihelix

Protein Properties

Length: 331aa MW: 38669.6 Da PI: 4.4312

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00426g03001.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.6	1.6e-13	98	185	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikeg.ekkr.tsessstcpyfd 83 Wt++e +L+e+ e+ +l+r++l+ +W ev++k+ + g+e++ +C++ ++ l+k+ykk+ + e+++ + +s++p+f+ Peinf101Scf00426g03001.1 98 WTEEESFVLLEVWGERFLELGRRSLRSEDWVEVAEKVsEMIGVEKGESECRNQLDALKKKYKKEMAKmERSGgGGGFHSKWPFFK 182 ***********************************5568*****************98655055554588899** PP trihelix 84 qle 86 +++ Peinf101Scf00426g03001.1 183 KMD 185 8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.098	90	155	IPR017877	Myb-like domain
Pfam	PF13837	1.7E-19	97	187	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence Send to blast
MEDSDDESEY PSRPNNNNSI YTPSLRSRRS IRNPSSSSYN RNTHYGYNDF HYTNDLDSEE 60 EDEQELSSGE NGYDGIPKKR KLESLNYQFA PRSKGGMWTE EESFVLLEVW GERFLELGRR 120 SLRSEDWVEV AEKVSEMIGV EKGESECRNQ LDALKKKYKK EMAKMERSGG GGGFHSKWPF 180 FKKMDMLMNL RMKGHCGLGC GLDSGEYVFM DPRMYLDRSN VLDEMRDSPA GSDAENDDEE 240 EEEEMEQGDD ESAKMLADSI QRFGQIYEKI ENSKRKQMME LEKMRRDMQR ELELQKKQIV 300 ERAQAEIAKI RDRNDNDDDD DEDTKDNVEK L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009783625.1	1e-149	PREDICTED: uncharacterized protein LOC104232187 isoform X1
Refseq	XP_016496917.1	1e-149	PREDICTED: trihelix transcription factor ASIL1-like isoform X1
TrEMBL	A0A0V0I9M6	1e-151	A0A0V0I9M6_SOLCH; Putative trihelix transcription factor ASIL2-like
STRING	XP_009783625.1	1e-148	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12060	20	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-73	Trihelix family protein