PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00442g00013.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 390aa    MW: 43438.7 Da    PI: 6.5811
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00442g00013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.94e-1687177186
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                               +W+++ +++Liea  +   +l+rg+l++++We+v++++     + ++  r+ +qCk++++ l+k+yk +k+++++ + +  st+p
  Peinf101Scf00442g00013.1  87 CWSEEATHTLIEAWGSHYMNLNRGNLRQQHWEQVADAVnrlhgHTKKQYRTDIQCKNRIDTLKKKYKVEKARDSESHGRYISTWP 171
                               7*************************************988887777789************************999999***** PP

                  trihelix  81 yfdqle 86 
                               +f++l+
  Peinf101Scf00442g00013.1 172 FFRSLN 177
                               ***997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.8E-2585179No hitNo description
Gene3DG3DSA:1.10.10.609.9E-488151IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MFRPHNHSDP HSSSNPNSST TSLLSHSTAA AAAAAAITMS DDDVPPSPSP SPSPPPNNKL  60
LALPPPPAYT PSPVSIRTPV FPSREDCWSE EATHTLIEAW GSHYMNLNRG NLRQQHWEQV  120
ADAVNRLHGH TKKQYRTDIQ CKNRIDTLKK KYKVEKARDS ESHGRYISTW PFFRSLNALI  180
GGDVKPSPGN ITPPLFPPPF IGVPVGLRSK RPMEYTVSPR SFATMAAPVE EDKDEEEEEE  240
MLSVVGGGSK RKGGGGGMVE GYKRLAEAIG SFSEIYERVE RDKQRQMVEL EKHRMQFMKD  300
LEVHRLKIIM ESQVQLQRLK RAKHNTQAVQ NAESMQVQSS VYVQDEGAFQ DESVQDAVGV  360
KDEGVENVGV KDEGVEASDS KRCWSLIEES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006348872.11e-116PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLM1BTN61e-114M1BTN6_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000526071e-115(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-43sequence-specific DNA binding transcription factors