PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00442g05018.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 211aa MW: 24279.9 Da PI: 5.9824

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00442g05018.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.8	5.6e-26	57	143	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +fY +YA++ GFsvr+ + ks+++++++ + fvCskeg+r ++ k ++r++ +tr gCk l v+k+ +g+w +++l+++H Peinf101Scf00442g05018.1 57 NFYLDYAHRNGFSVRRGRVAKSRKDKSVIGQVFVCSKEGFRPKKYFK---NNRPQDVTREGCKVLLYVSKKGEGTWAIHRLVSDH 138 6**************************************998877...999**************************** PP FAR1 86 nHela 90 nHela Peinf101Scf00442g05018.1 139 NHELA 143 *97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.4E-23	57	143	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence Send to blast
MEVSNSDDQH LEGAEVTLEE IESDTDETTQ SVPDLGVENR KEPYIGMEFS SLDDAFNFYL 60 DYAHRNGFSV RRGRVAKSRK DKSVIGQVFV CSKEGFRPKK YFKNNRPQDV TREGCKVLLY 120 VSKKGEGTWA IHRLVSDHNH ELATPSSQKF LQSKRKKSEA QKNLIDLLDD SGFRPGFDES 180 SFEFIPTKSS QFLSNKIEDS EYQIRQKHEE I

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019068484.1	6e-77	protein FAR1-RELATED SEQUENCE 5
Refseq	XP_025884722.1	6e-77	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A3Q7EE03	7e-71	A0A3Q7EE03_SOLLC; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	4e-27	FAR1 family protein