PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00456g04008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 494aa    MW: 55250.7 Da    PI: 6.7235
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00456g04008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.46.2e-14307352454
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                h + Er+RR++iN++f++Lr+llP+      +K +Ka++L  + eY++sL
  Peinf101Scf00456g04008.1 307 HHMISERKRREKINESFQQLRSLLPPG-----TKKDKASVLASTAEYLSSL 352
                               68899********************97.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.34E-13303357No hitNo description
PROSITE profilePS5088815.878303352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-18305379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-16307370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-11307352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-15309358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MDSLFFLEKG DRTAFLVQMM ESFGCTYICL WQYFQPSNCL MSLDGIYQGE NEVARRLFEE  60
YRHSWLIMDN GRVPGLALKN STPYIELPLA DLQSLASIPV QLQFYLEAGI KVNLETVMMN  120
LFREDFTRQA AVTAATGGLL QPIMPSTDRN RPSSSSSSLR SLLSTHDSPE YSSLFFNVAT  180
STSCVPIPPI SSIAMPYQQA NIQTSNRIGD LQFPLAENEN DAITRAYLAV ISSHSSSSSS  240
SSSAREIVTQ KTSSFRRYFG GPNVQLTART RSENMLKRSI IFYRNLNMIM RRQEQIQANR  300
FTSTQVHHMI SERKRREKIN ESFQQLRSLL PPGTKKDKAS VLASTAEYLS SLKVQVEELS  360
KKNEMLEAQV ILTQRQPTEP EQLVEACSSG GTGIGKSLHV QITHVTESTS EATIVDLQVS  420
VRGESSILLD MVLRLLDFLK TFNNVSIESV EANSRNTQPA GPVNHITLRL KIQDGELDET  480
AFQEAVKRVV GDSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1311316ERKRRE
2312317RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624851.20.0PREDICTED: putative transcription factor bHLH041 isoform X1
TrEMBLA0A1S3XLQ61e-178A0A1S3XLQ6_TOBAC; putative transcription factor bHLH041
STRINGXP_009793632.11e-178(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.13e-58bHLH family protein