PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00486g02014.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 227aa MW: 26236.6 Da PI: 6.7124

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00486g02014.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.5	1.7e-06	16	60	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + +E++RR++++ f++L +llP+ a + + + Av+Y+k+L Peinf101Scf00486g02014.1 16 KYVEKNRRNKMKALFNQLYSLLPPhA-----EAMALPDQIDAAVNYLKNL 60 569*********************44.....4444457777777777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.525	10	60	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.0E-7	12	70	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.83E-8	12	69	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence Send to blast
MYSGQVDNYA SKLERKYVEK NRRNKMKALF NQLYSLLPPH AEAMALPDQI DAAVNYLKNL 60 EMKLEKRKVH YLEELRSRKR TYSCMENQNP STTTKLFPQI EVHEMSPTMD IILITGLGNV 120 AMFYNIIRLL HEEAFEVITA NFSLHGNSVL QIYHETKVSI CSLKILSCMH IWYKAICVKH 180 QCSLLAVISY IDVDDAVEIL LRLWGYEIES EMLGFDITDL LPIGLVS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016541250.1	2e-78	PREDICTED: uncharacterized protein LOC107841915
TrEMBL	A0A1U8ED51	6e-77	A0A1U8ED51_CAPAN; uncharacterized protein LOC107841915
STRING	XP_009591015.1	2e-66	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5297	14	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	2e-22	bHLH family protein