PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00493g00041.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HB-other
Protein Properties Length: 564aa    MW: 63995.1 Da    PI: 7.9038
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00493g00041.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.96.3e-171872357
                              --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
                  Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                              kR   t+ q+e+Le+l+e+++yps e +++LA++ gLte+q++ WF+ rR k+k+
  Peinf101Scf00493g00041.1 18 KRIIKTRAQVEALEKLYEEHKYPSDELKADLAESSGLTEKQISGWFCHRRLKDKR 72
                              78999************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-18372IPR009057Homeodomain-like
SuperFamilySSF466899.41E-161173IPR009057Homeodomain-like
PROSITE profilePS5007116.1311373IPR001356Homeobox domain
SMARTSM003892.7E-171577IPR001356Homeobox domain
CDDcd000867.08E-151672No hitNo description
PfamPF000461.4E-141872IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 564 aa     Download sequence    Send to blast
LSEVHSEDDK GHTEKKFKRI IKTRAQVEAL EKLYEEHKYP SDELKADLAE SSGLTEKQIS  60
GWFCHRRLKD KRLSNGEIYA NGRQDRSSGV IQDHGSGFRQ DSCGSTKQVD DKKYDHREVE  120
SRRLTGPEFS TAEVTYDVGT HFRGKSNRMD DASSRSSSSL RNESFLQNAE SYDIATSRYI  180
SQNLPTDYKG VKPKNGPSGY LKVKGQVENA AITAVKKQLG RHYRLDGPPL GVEFDPLPPG  240
AFESSGASPV NDPYYSTEPV PACSPDMSNV YRRSNGYRSN SVTNSHDSDL DGSSFKRTKS  300
AHPEYCYNQK PERKSSEHNE YPEWNSPPGM YEGSARKMTN SHDSDLDGSS FKRTKSARPE  360
YCYNQKPERK SSEHNEYPEW NSPSGMYEGS ARKMTNNSRE NCKFTAKHGR AEIRTSTGSS  420
HGIRSPYDGK VNGEQVKPRF PSHSEVSRKV VEKDHFDCRR SEFKGSYYHN IGERELPKIV  480
EKDNIMENRT AVDENSLVRV KVPRHNETRV FKRPMNEVPD HREYARASAI GVPLQSNHLM  540
RTAAEMPPNY SEDEETEDSS SFEG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754500.0HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009630181.10.0PREDICTED: uncharacterized protein LOC104120160 isoform X1
RefseqXP_016474485.10.0PREDICTED: uncharacterized protein LOC107796248
TrEMBLA0A1S4ACU00.0A0A1S4ACU0_TOBAC; uncharacterized protein LOC107796248
STRINGXP_009630181.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34362242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.14e-66HB-other family protein