PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00500g01032.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TCP
Protein Properties Length: 368aa    MW: 42112.7 Da    PI: 6.942
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00500g01032.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.42.5e-381272883132
                       TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................... 65 
                                 kdrhski T++g+RdRR+Rls++ a++fF Lqd+L fdk+sktieWLl +++ aikelt+                       
  Peinf101Scf00500g01032.1 127 SNKDRHSKINTAQGPRDRRMRLSLDAARKFFNLQDMLQFDKPSKTIEWLLIKSEYAIKELTKGigaaldpkesftntgnigaist 211
                               579*****************************************************************99999999999988853 PP

                       TCP  66 ssssa...sec....eaesssssas.......nsssg........kaaksaakskksqksaasalnlakesrakarararertre 128
                               +  ++   sec            ++       +   +        + + +++k+ k+++s   ++ + +esr+ ara+arert+ 
  Peinf101Scf00500g01032.1 212 N--ASsniSECeskvV-------DNltiasdeF---SsnhkmpkeSFSIKEKKKGKTSRSRCPFHTITRESRNLARANARERTKR 284
                               1..3322444432221.......1112222222...134456553222233344455555555677777***************9 PP

                       TCP 129 kmri 132
                               k+++
  Peinf101Scf00500g01032.1 285 KKSL 288
                               9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.0E-39127286IPR005333Transcription factor, TCP
PROSITE profilePS5136933.892128186IPR017887Transcription factor TCP subgroup
PROSITE profilePS513708.683268285IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MYPPSNNNCN YNNPIFSSLL HNMPSPCIQY EHEIFFEHYH DYYLQEQQIP FSEYTSIDIL  60
DESSETAKSQ LNCTDSVKVL CDKEIVTINH GPSENEGEEG RENKGGEMSS TTSNRQQISR  120
NKTNRSSNKD RHSKINTAQG PRDRRMRLSL DAARKFFNLQ DMLQFDKPSK TIEWLLIKSE  180
YAIKELTKGI GAALDPKESF TNTGNIGAIS TNASSNISEC ESKVVDNLTI ASDEFSSNHK  240
MPKESFSIKE KKKGKTSRSR CPFHTITRES RNLARANARE RTKRKKSLED LCAQVQHSNM  300
VNHSLYEVEE LTSHQDNQLL GTKEINRADE NNWVVNGNWN SFGIFNFQQN AGIFHENQFT  360
DLQFCGKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608156.17e-94PREDICTED: transcription factor TCP12-like isoform X2
RefseqXP_016448763.17e-94PREDICTED: transcription factor TCP12-like isoform X2
TrEMBLA0A1J6ICT73e-93A0A1J6ICT7_NICAT; Transcription factor teosinte branched 1
STRINGXP_009608155.12e-91(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24822256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-24TCP domain protein 12