PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00500g01046.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB
Protein Properties Length: 163aa    MW: 18771.1 Da    PI: 8.4718
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00500g01046.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.41.8e-09957447
                              S-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding  4 WTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqky 47
                              WT +E+  + +a++   +       +W +Ia +++ ++t +q+k ++q++
  Peinf101Scf00500g01046.1  9 WTRDEERAFENAIAIIHSIeysnkeQWQKIALMVP-TKTIEQLKQHYQML 57
                              **************9987799999***********.************87 PP
2Myb_DNA-binding41.92.3e-1397142247
                               SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               ++WT+eE+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  Peinf101Scf00500g01046.1  97 LPWTAEEHRLFLLGLEEFGKGDWRSISRNFVISRTPSQVASHAQKY 142
                               69*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512947.165162IPR017930Myb domain
SMARTSM007179.8E-5560IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-4858IPR009057Homeodomain-like
CDDcd001671.09E-7958No hitNo description
PfamPF002491.4E-7957IPR001005SANT/Myb domain
SuperFamilySSF466892.01E-8964IPR009057Homeodomain-like
PROSITE profilePS5129418.35891147IPR017930Myb domain
SuperFamilySSF466895.24E-1692148IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-1695145IPR006447Myb domain, plants
SMARTSM007171.2E-1195145IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.2E-1197144IPR009057Homeodomain-like
PfamPF002491.9E-1198142IPR001005SANT/Myb domain
CDDcd001678.84E-1098143No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MSVSTSVMWT RDEERAFENA IAIIHSIEYS NKEQWQKIAL MVPTKTIEQL KQHYQMLVDD  60
VTAIDAGYVP IPNYTIVKAS SSTDESSHGC QERRKGLPWT AEEHRLFLLG LEEFGKGDWR  120
SISRNFVISR TPSQVASHAQ KYFNRLESNS RGRRRSSIHD ITL
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012092968.14e-70transcription factor MYBS1
SwissprotQ9FNN64e-57SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A067JJD39e-69A0A067JJD3_JATCU; Uncharacterized protein
STRINGXP_009616490.11e-72(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2489922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-53MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]