PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00500g02032.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 547aa    MW: 60611.8 Da    PI: 7.2153
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00500g02032.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.22.9e-13256303255
                               HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               r +h++ E+rRR++iN++  +Lre++P++    ++K +Ka+ L +++eYI+ Lq
  Peinf101Scf00500g02032.1 256 RSKHSATEQRRRSKINDR--QLREIIPNS----DQKRDKASFLLEVIEYIQFLQ 303
                               889**************8..********9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.0E-19251323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-15252323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.08254302IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.04E-11256305No hitNo description
PfamPF000108.8E-11256303IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-9260308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MELPQSRPFG TEGMKMTHDF LSLYSPIEQD PRPPQGSYLK THDFLQPLEQ TRETVGKKTK  60
VEIEAVEKSR SPAALSAEHS LPGGIGTFSI SYVHQKVPKP EANLFAGTQA SSTERDDRNS  120
NCSSYSGSGF ALWNESARNK GKTGKENRGG DRHVIRETGE NIGGQPSASL ERQSQLSSDH  180
NHNTATLSTL SSAQQPSAVE NQSFLNMITS AKNAREEYDD EEEEFDVKKE SPSFSRGNLS  240
VKVDGKSSDQ KPNTPRSKHS ATEQRRRSKI NDRQLREIIP NSDQKRDKAS FLLEVIEYIQ  300
FLQEKAHKHE DSYEGSEQKP SMLPWNKSHG MTQGFFDRSQ SINSASSPAL ICAGKFDENK  360
IQTTSPASGQ TLEPNRTSTM RESSRQSEFS NKAENLCMQP NAFPFCGSTQ IESLQSRLAS  420
DAGTLELNSQ PQFCLSRSNM TDHAVTNDKL KGQEVSIEGG TISISSVYSK RLLNTLTQAM  480
QNSGVDMSQA SMSVQIDLGK KANDRSNASM SNFKGDTVST SNHQLPQFID TRTRDESVHV  540
FKRLKTS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754452e-54HG975445.1 Solanum pennellii chromosome ch06, complete genome.
GenBankHG9755182e-54HG975518.1 Solanum lycopersicum chromosome ch06, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009793272.10.0PREDICTED: transcription factor BIM1-like isoform X1
RefseqXP_016493370.10.0PREDICTED: transcription factor BIM1-like isoform X1
TrEMBLA0A1S4BWU10.0A0A1S4BWU1_TOBAC; transcription factor BIM1-like isoform X1
TrEMBLA0A1U7XMJ40.0A0A1U7XMJ4_NICSY; transcription factor BIM1-like isoform X1
STRINGXP_009793272.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39692345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.42e-89bHLH family protein