PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00500g05004.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

MYB_related

Protein Properties

Length: 383aa MW: 42375.8 Da PI: 4.2404

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00500g05004.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	2e-08	118	165	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +W++eE+el+ ++v ++ W+ a +++ R++k+++s+++++ Peinf101Scf00500g05004.1 118 KWSEEEEELFHEVVFSNPSSlgknFWNQLAVEFP-SRSRKELVSYYFNV 165 8***********8766666666******.*********996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.1E-5	114	177	IPR009057	Homeodomain-like
SMART	SM00717	1.2E-4	115	168	IPR001005	SANT/Myb domain
SuperFamily	SSF46689	4.68E-5	116	166	IPR009057	Homeodomain-like
CDD	cd00167	0.00169	118	166	No hit	No description
Pfam	PF00249	4.7E-7	118	165	IPR001005	SANT/Myb domain
PROSITE profile	PS50090	6.295	118	166	IPR017877	Myb-like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence Send to blast
MVQKRPFGEE ELYEIPSKQP RHVEPSNQLV SFLEFPCESL AAKSYASGGD EDNFSKVKDP 60 TDKRTDGGDV AEVPFSSEKA IETGNHGSAS NSSWATSSTS EEDVRLGFYD MGEVVAEKWS 120 EEEEELFHEV VFSNPSSLGK NFWNQLAVEF PSRSRKELVS YYFNVFILRK RAKQNRFDPL 180 NIDSDNDEWH EIDDDIVAAG AKMTDEDEYS VVESPVYQLY PSCNEIYEDD KQAYDEEAGG 240 ATSEDVGSRK VSSDAAEACP DKLIVNNSSS GHSILPLDRH HSNDEGDHGV QNNCYTTDAA 300 GVASEAQKGK TDNCKHWESD FAGVGSGRGH DFAMEPSNGK EWDIGYLSCA KNKVDLLSTC 360 SMIEEVFGDG AWSSKNRDGH GLS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence Send to blast

MVQKRPFGEE ELYEIPSKQP RHVEPSNQLV SFLEFPCESL AAKSYASGGD EDNFSKVKDP  60
TDKRTDGGDV AEVPFSSEKA IETGNHGSAS NSSWATSSTS EEDVRLGFYD MGEVVAEKWS  120
EEEEELFHEV VFSNPSSLGK NFWNQLAVEF PSRSRKELVS YYFNVFILRK RAKQNRFDPL  180
NIDSDNDEWH EIDDDIVAAG AKMTDEDEYS VVESPVYQLY PSCNEIYEDD KQAYDEEAGG  240
ATSEDVGSRK VSSDAAEACP DKLIVNNSSS GHSILPLDRH HSNDEGDHGV QNNCYTTDAA  300
GVASEAQKGK TDNCKHWESD FAGVGSGRGH DFAMEPSNGK EWDIGYLSCA KNKVDLLSTC  360
SMIEEVFGDG AWSSKNRDGH GLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	173	LRKRAKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016515357.1	1e-157	PREDICTED: uncharacterized protein LOC107832069
Refseq	XP_016515358.1	1e-157	PREDICTED: uncharacterized protein LOC107832069
Refseq	XP_016515359.1	1e-157	PREDICTED: uncharacterized protein LOC107832069
TrEMBL	A0A1S4DPK6	1e-156	A0A1S4DPK6_TOBAC; uncharacterized protein LOC107832069
STRING	XP_009595362.1	1e-156	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1514	16	25