PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00500g16021.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 213aa    MW: 24257.6 Da    PI: 4.4148
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00500g16021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.2e-091445132
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                              +g W++eEde+l+++++++G g+W+++++   
  Peinf101Scf00500g16021.1 14 KGLWSPEEDEKLYNYITKFGVGCWSSVPKLAA 45
                              678************************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.95E-8746IPR009057Homeodomain-like
PROSITE profilePS5129410.911961IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-11943IPR009057Homeodomain-like
PfamPF002496.2E-71444IPR001005SANT/Myb domain
CDDcd001672.61E-61747No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MGRHSSFVKE KLRKGLWSPE EDEKLYNYIT KFGVGCWSSV PKLAASRQLT EASKDQLVSK  60
QVFDPLFLYE FQANVNPSGY SLRPYDHNQN QIEGNTNFGF FSMPSLTNFE QGHMTETDFS  120
ESSSSRMSLL YISEAKESSS NSSNMISHHN DAGIQMNEML ENSQALSWDV DNKIDSLFQY  180
PYDGIKNEED FNNPLSSLSE DLSGENLDVF HQI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754452e-34HG975445.1 Solanum pennellii chromosome ch06, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009773279.11e-69PREDICTED: myb-related protein 330-like isoform X1
RefseqXP_009773281.11e-69PREDICTED: myb-related protein 330-like isoform X2
RefseqXP_016473081.11e-69PREDICTED: myb-related protein 330-like isoform X1
TrEMBLA0A1S4A9242e-68A0A1S4A924_TOBAC; myb-related protein 330-like isoform X1
TrEMBLA0A1U7W7V32e-68A0A1U7W7V3_NICSY; myb-related protein 330-like isoform X2
TrEMBLA0A1U7WF532e-68A0A1U7WF53_NICSY; myb-related protein 330-like isoform X1
STRINGXP_009773279.14e-69(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1877122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-20myb domain protein 86