PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00519g04010.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 609aa    MW: 67324.5 Da    PI: 6.2476
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00519g04010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.89.3e-33194251260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               dDgy+WrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers  d++++ei+Y+g Hnh+k
  Peinf101Scf00519g04010.1 194 DDGYTWRKYGQKHVKGSEFPRSYYKCTQQNCPVKKKVERSP-DGQITEIVYKGAHNHQK 251
                               8****************************************.***************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.5E-29186252IPR003657WRKY domain
SuperFamilySSF1182901.22E-25189250IPR003657WRKY domain
SMARTSM007741.7E-36193251IPR003657WRKY domain
PROSITE profilePS5081122.63194252IPR003657WRKY domain
PfamPF031061.2E-25194250IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-9382411IPR003657WRKY domain
SuperFamilySSF1182906.15E-11390434IPR003657WRKY domain
PROSITE profilePS5081114.814392434IPR003657WRKY domain
SMARTSM007744.2E-8397433IPR003657WRKY domain
PfamPF031062.5E-4398415IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.8E-5412434IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MEGNIGEPLN EWNCQVIGNI MDSKTGLDDT QETAVKVEEN GANEELIIEN FDTNNKGSIA  60
ERRAVKCGFK ASSMSIAEQL RVASTTPAMS PPPARPTFLT IPPGLTPAAL LDSPVMLPNS  120
QTSRDQFEFP VESPKVTALK NCSSDTPPAT NGQENMTCIG STDTQLGNSS HIRVNQFEQR  180
GAMTPNNITS NSSDDGYTWR KYGQKHVKGS EFPRSYYKCT QQNCPVKKKV ERSPDGQITE  240
IVYKGAHNHQ KVQPTRRATM SSCSYGLGDM SEMNEGIWRN MQLGGNKNGV LERTSSASVL  300
TEVSDQLMSN NHQKNMNVFE SAGTTTPEPS STLASRDDED EDRATEGSTS LGDDADDCEF  360
EHKRRRREFY SAETSLSSRT AREPRVVVQI ESEIDILDDG YRWRKYGQKH VERAPDNLKS  420
VITTYEGKHN HEVPSANKTT NSAATGNQAS ASTSNGQSSM TSPKIHKISN LGMQVQDFNL  480
QFERKPFDYV RPSFLGSHLN DLRFGTASSI YDLKFPNLQS PLSYNSFLSR PFTPLQMPDF  540
PLPLSLPMSL PVGHNVPPLG GFHFNNIPLT PSGASSHSTI AVSDQRAHND NNNRNPRLVK  600
VNEDMKNEN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-161942491571WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR5596781e-77KR559678.1 Nicotiana benthamiana WRKY transcription factor (WRKY79) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009598832.10.0PREDICTED: probable WRKY transcription factor 33 isoform X1
TrEMBLA0A1S4BBY80.0A0A1S4BBY8_TOBAC; probable WRKY transcription factor 33 isoform X1
STRINGXP_009598832.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57672237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26440.14e-72WRKY DNA-binding protein 34