PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00554g01004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 221aa    MW: 24447.3 Da    PI: 6.3683
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00554g01004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.13.1e-111055346
                              SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                               W+ e d  + +a + ++ g   +W++Ia+ ++ g+tl ++k+++  
  Peinf101Scf00554g01004.1 10 VWSREQDIAFENALATHPEGsayRWERIAADVP-GKTLVEVKNHYEL 55
                              7********************************.***********75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.702357IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.4E-6665IPR009057Homeodomain-like
SuperFamilySSF466892.09E-10664IPR009057Homeodomain-like
SMARTSM007172.2E-8759IPR001005SANT/Myb domain
PfamPF002492.9E-81054IPR001005SANT/Myb domain
CDDcd001671.07E-81157No hitNo description
PROSITE profilePS500905.54185138IPR017877Myb-like domain
SuperFamilySSF466895.98E-587127IPR009057Homeodomain-like
SMARTSM007175089132IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MTVAKSRSSV WSREQDIAFE NALATHPEGS AYRWERIAAD VPGKTLVEVK NHYELLLDDN  60
RKEEWDLSSL NSESNDGDKS TRADQERRKG IAWTEDEHRL FLLGLEKYGK ELLHKWPVMP  120
KNILRLNSMN KDRRRSSIHD ITSVSDGDVS VPQVPITGET IGAGAGGSSG RSNKQSTPTS  180
PLGVGMYEAT TFGQPVTGPL VSVVGTPVNL SAPNYMQYSF Q
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754431e-44HG975443.1 Solanum pennellii chromosome ch04, complete genome.
GenBankHG9755161e-44HG975516.1 Solanum lycopersicum chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016572400.12e-88PREDICTED: transcription factor DIVARICATA-like
RefseqXP_027097519.12e-88transcription factor SRM1-like
SwissprotQ9FNN62e-60SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A2G2ZGY67e-89A0A2G2ZGY6_CAPAN; Transcription factor DIVARICATA
STRINGGorai.013G067600.18e-86(Gossypium raimondii)
STRINGPGSC0003DMT4000651026e-86(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41492445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-47MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]