PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00570g00009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 241aa    MW: 27582.1 Da    PI: 9.4024
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00570g00009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.61.1e-09761253990
                      FAR1  39 gkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                               g++   ++  ++++r+r e r+gC a+++ k + +g wev ++  eHnH++ 
  Peinf101Scf00570g00009.1  76 GQSPLYSNY-QERKRQRLEYRCGCLARIRFKIS-NGMWEVFEFCDEHNHPMI 125
                               333333333.78999****************99.***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.3E-783125IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MGDSLVDNDD FDNEDNLPLV VPCLFLISGL HNDGQRSPTV QNVSDINNVF TLKIGMKFSS  60
EDESYEAYNS YVVAKGQSPL YSNYQERKRQ RLEYRCGCLA RIRFKISNGM WEVFEFCDEH  120
NHPMIEKNLR NFIQSGRKLT DSTKAANDIE SKEIARKYLY QARVEITKLQ GELYAEASHK  180
SCSKSRIYVG PSSGVNDQVL DPVKKKGKGN GYGRLKPRSE QRKKRASHKT LKARATEQQQ  240
Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203224KKKGKGNGYGRLKPRSEQRKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_009628526.14e-45(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1726931