PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00576g01021.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 413aa MW: 44932.6 Da PI: 9.6372

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00576g01021.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.6	5.6e-38	30	90	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ ++cprC+s ntkfCyynnyslsqPr+fCk+CrryWtkGGalr vP+Ggg+rknkk + Peinf101Scf00576g01021.1 30 QEQVINCPRCNSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRSVPIGGGCRKNKKIK 90 67899*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-25	24	84	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.3E-32	32	88	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.919	34	88	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	36	72	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence Send to blast
MAPDNKAEKS QSKEGNQSSS DRKTSTVRRQ EQVINCPRCN SPNTKFCYYN NYSLSQPRHF 60 CKTCRRYWTK GGALRSVPIG GGCRKNKKIK SSSKDYSSAT SSSDIGGFNL FQGFSPAMDF 120 PKLNSSTTYS IFNENSSFGG ISTSGSSPCF NLEHSAGSLM GFNLYLSKSL LKQGGGCRKN 180 KKIKSSSKDY SSATSSSDIG GFNLFQGFSP AMDFPKLNSS TTYSIFNENS SFGGISASGS 240 SPCFNLEHSA GSLMGFNLYL SKSLLKQGKV TGGVRGMGSV NDTGNLASSI ESLSSINQDL 300 HWKLQQQRLA NMLFGGEDQK DSNVSSVPLG NIQKPQPILF QKLENFKPET AFGNNTSRKE 360 NSGCGNFATE WFFDNSFTSV NPTPTNSSNG NANENSNSWN DFQAWSNLNQ YST

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence Send to blast

MAPDNKAEKS QSKEGNQSSS DRKTSTVRRQ EQVINCPRCN SPNTKFCYYN NYSLSQPRHF  60
CKTCRRYWTK GGALRSVPIG GGCRKNKKIK SSSKDYSSAT SSSDIGGFNL FQGFSPAMDF  120
PKLNSSTTYS IFNENSSFGG ISTSGSSPCF NLEHSAGSLM GFNLYLSKSL LKQGGGCRKN  180
KKIKSSSKDY SSATSSSDIG GFNLFQGFSP AMDFPKLNSS TTYSIFNENS SFGGISASGS  240
SPCFNLEHSA GSLMGFNLYL SKSLLKQGKV TGGVRGMGSV NDTGNLASSI ESLSSINQDL  300
HWKLQQQRLA NMLFGGEDQK DSNVSSVPLG NIQKPQPILF QKLENFKPET AFGNNTSRKE  360
NSGCGNFATE WFFDNSFTSV NPTPTNSSNG NANENSNSWN DFQAWSNLNQ YST

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021670145.1	2e-67	dof zinc finger protein DOF5.7-like
Swissprot	Q9LSL6	4e-32	DOF57_ARATH; Dof zinc finger protein DOF5.7
TrEMBL	A0A2G2VDA5	4e-65	A0A2G2VDA5_CAPBA; Dof zinc finger protein DOF5.3
STRING	EOX91892	1e-65	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5242	22	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	4e-32	Dof family protein

Publications ? help Back to Top
Castorina G,Fox S,Tonelli C,Galbiati M,Conti L A novel role for STOMATAL CARPENTER 1 in stomata patterning. BMC Plant Biol., 2016. 16(1): p. 172 [PMID:27484174]