PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00590g21026.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 260aa    MW: 30103.4 Da    PI: 9.3643
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00590g21026.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.64.7e-091275973
                      FAR1  9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekd 73
                              ++G svr+++ +k+k +g +t+r+f+ +keg+r +++++  + +++r+et+tgC  ++ ++++++
  Peinf101Scf00590g21026.1 12 SIGVSVRREYANKNKVQGCVTSRKFKYYKEGFRGKDNRD-PTVQKHRKETKTGCLTHIIISRHSN 75
                              5799********************************999.889999**************99864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.3E-61275IPR004330FAR1 DNA binding domain
PfamPF105511.9E-12187260IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MGNREWKNEI TSIGVSVRRE YANKNKVQGC VTSRKFKYYK EGFRGKDNRD PTVQKHRKET  60
KTGCLTHIII SRHSNRIGTY SSSCSSIFGI LLPSQRKIKR AQAYQIDILD DSEICPKASF  120
DYVARQAGGQ SVLDYTKEDH KNYLRDKQKN SLKHGVACSF VEYFEKKTQE DPTFYFSLHL  180
DEDKYRSLAL FVGLYNHRKM VTFGATLLYG ESIELLAWLF NDFFRIMAAD KPQTFITDQD  240
FAIFAAVSLV MLQTYHCLCI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016463957.11e-98PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A1S3ZI803e-97A0A1S3ZI80_TOBAC; protein FAR1-RELATED SEQUENCE 5-like
STRINGXP_009619707.13e-99(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30211740
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-20FAR1-related sequence 5