PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00622g08001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 188aa    MW: 21311.9 Da    PI: 7.941
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00622g08001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.84.5e-121555147
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                              +g+WT+eEd ll ++++    + W++Ia +++ gRt++++k++w+++
  Peinf101Scf00622g08001.1 15 KGSWTEEEDFLLRKCIE----K-WSLIAGRLP-GRTANDVKNYWNTH 55
                              799*************8....4.9********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.2691060IPR017930Myb domain
SuperFamilySSF466891.51E-121162IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.3E-171260IPR009057Homeodomain-like
SMARTSM007171.4E-91458IPR001005SANT/Myb domain
PfamPF002498.5E-111555IPR001005SANT/Myb domain
CDDcd001673.17E-111756No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MNTIPICTPT LGVRKGSWTE EEDFLLRKCI EKWSLIAGRL PGRTANDVKN YWNTHFQRKL  60
FSPQIQGKKC RSAVKITENT IIRPQPRNFS STKNVSLGRN KSITNGTIHK DETSKTIIRT  120
NEKQTTEAST DNGDQWWASL LDDRNEFDEE AAAGKTPSCK INSELETPTL LQEGETGWGD  180
IDLWSLLN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019256541.14e-49PREDICTED: transcription factor MYB113-like
TrEMBLA0A3Q8CAG51e-109A0A3Q8CAG5_PETHY; Anthocyanin synthesis regulator 2
STRINGXP_009626596.15e-43(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.11e-16myb domain protein 113