PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00622g09013.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 209aa    MW: 23651.6 Da    PI: 8.7373
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00622g09013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-161576147
                              TSSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg................tWktIartmgkgRtlkqcksrwqky 47
                              +g+WT+eEd ll ++++++G g                 W++Ia +++ gRt++++k++w+++
  Peinf101Scf00622g09013.1 15 KGAWTEEEDFLLRKCIEKYGEGkwhlvpvragkqtctiKWSLIAGRIP-GRTANDVKNYWNTH 76
                              79**********************************************.************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.5E-18781IPR009057Homeodomain-like
PROSITE profilePS5129417.8261081IPR017930Myb domain
SuperFamilySSF466893.35E-121273IPR009057Homeodomain-like
SMARTSM007173.1E-141479IPR001005SANT/Myb domain
PfamPF002499.3E-151576IPR001005SANT/Myb domain
CDDcd001672.25E-111776No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MNTIPICTST LGVRKGAWTE EEDFLLRKCI EKYGEGKWHL VPVRAGKQTC TIKWSLIAGR  60
IPGRTANDVK NYWNTHYRRK LISLQRQGKK CRSAIKITEN TIIRPQPRSF SSTKNVSLGS  120
NKSITNSTIH KDESSKRVVR TNEKQTTEAL TDNGFQWWAS LLDDPNEFDE EAAAGSTAFC  180
KINSEEETPT SLQEGETGWG DIDLWSLLN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019240653.15e-72PREDICTED: transcription factor MYB113-like
RefseqXP_019240654.15e-72PREDICTED: transcription factor MYB113-like
TrEMBLA0A3S6QBC91e-140A0A3S6QBC9_PETIN; Anthocyanin synthesis regulator 3
STRINGXP_009626596.17e-65(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56650.12e-33production of anthocyanin pigment 1