PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00650g17002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 723aa    MW: 77535 Da    PI: 7.263
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00650g17002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.43.5e-15521567455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                hn  Er+RRdriN+++  L+el+P++      + +Ka++L +A+eY+k Lq
  Peinf101Scf00650g17002.1 521 VHNLSERKRRDRINEKMRALQELIPNC-----NRADKASMLDEAIEYLKTLQ 567
                               6*************************8.....69*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.8E-20514586IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.835517566IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.04E-16520571No hitNo description
Gene3DG3DSA:4.10.280.106.8E-19521575IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-12521567IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-16523572IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    Send to blast
MPLSEFLERA GKLGSGQQKM ASTTDLSSFP ENEFVELVWD NGQLMMQGQS SRPKKRTTFN  60
NLSSNASNIR GLENSSSSKI GKCGAMNSML NDMPLSVPTR EVDMSQEDDV VPWLSYSADD  120
SLQQDYCSQL LPDISGVAAN EPSRQMTGGS HSVPIHNVEN LEQRNASKIS PNSRFSMLRS  180
WSPQKGHASV PSLGSGFSDI VSSNTSNATA SQSGFATLDK KGCSDRSIGG SHNVQIHNDN  240
LEQRNTPKVY PTSRFGQLSS WSPQKDHASV PSLGSGVSNI VSSNTINNPV SGFGNSNQSQ  300
ASDGGIKRMT IQKQNMTSGD SSLFNFAHFS RPSTFHKGSL NGESAVAGSS IVAVKGNNER  360
GNVASCSNPV SANPVEPHFS SEKENDLHFQ PKMASSKVDL ETSLPSHLDR SCPVEQSDNL  420
CRDNTSNNDK SPGQFTGESA TKEYPDGKRN VEPAVACSSV CSASSAERAS SAQPHNRKRK  480
SHDNEESGCR SEDVEEESFD VKRAGHVHRS AGSKRGRAAE VHNLSERKRR DRINEKMRAL  540
QELIPNCNRA DKASMLDEAI EYLKTLQLQI QIMSMGAGLC APPMMFPMGM GHMPATHMPH  600
FSPMGFRMGM GFGMGMHENG GSPGCPIFPM PTPPQGAHFP SPPVTGSTIF PGLSGYNLHA  660
FGHPGQGPPI SAPQAPFVPL AGQPSTSSAM GLNVARTGVH ADTPSQVQAT NEAQHKSAFV  720
AEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1477481KRKSH
2525530ERKRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006358519.10.0PREDICTED: transcription factor PIF3-like
RefseqXP_015169448.10.0PREDICTED: transcription factor PIF3-like
TrEMBLM1BK410.0M1BK41_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000470790.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49652437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.28e-39phytochrome interacting factor 3