PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00652g02001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 241aa    MW: 27663.1 Da    PI: 6.4524
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00652g02001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08136176954
                               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Peinf101Scf00652g02001.1 136 ARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 176
                               699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.926127176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-15132195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-12133190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-12133182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.03E-10133181No hitNo description
PfamPF000106.7E-6137176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0010500Biological Processtransmitting tissue development
GO:0048462Biological Processcarpel formation
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MDDHIFHNQQ QQQQHQLQQQ EEDACFNHHH HIWPSFPLQN PHHSHHVIPS SSNQLQQQVL  60
PFDHVVNNHV QTLLADHDQE RDEDEQEEEA EEELGAMKEM MFKIAAMQPV DIDPATIRKP  120
KRRNVRISND PQSVAARLRR ERISEKIRIL QRLVPGGTKM DTASMLDEAI RYVKFLKRQI  180
RQLQSANHPL PPPQVPVPPC PSTENWANNN IVTPAKALVL GSSSTMVTPN ASDPMYEVIG  240
N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136141RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019263736.11e-103PREDICTED: transcription factor IND-like
TrEMBLA0A2P1BUV61e-110A0A2P1BUV6_9SOLA; Hecate3 (Fragment)
STRINGXP_009783821.11e-102(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75223101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.14e-46bHLH family protein