PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00661g03026.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 324aa MW: 35942.8 Da PI: 8.2144

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00661g03026.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.4	7.2e-10	45	94	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f eL l ++ +K++Ka+iL +++ +k+L Peinf101Scf00661g03026.1 45 RKVQKADREKLRRDRLNEQFTELGNTLDPD----RPKNDKASILSDTIQVLKDL 94 5677889******************997....79*************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	1.1E-12	44	117	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.93E-13	44	110	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	13.338	44	94	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	9.3E-8	45	94	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.32E-7	45	99	No hit	No description
SMART	SM00353	2.7E-7	50	100	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MDKSNSKTWY NHIPNSSIAD STQLPSDSST KQKPEAELKD SVAARKVQKA DREKLRRDRL 60 NEQFTELGNT LDPDRPKNDK ASILSDTIQV LKDLTAQVSR LKSEYAALTD ESRELTQEKT 120 DIREEKASLK SDIESLNAQY QQRLRTMYPW AGMDHSMVMH PPSYSYPVPV PIPTGPIPMH 180 PSLQHYPFFG NQNPAAVPNP CPPFVPYMAP STLVEQQPTQ QMSPVMQPSS RTHGSGRQDS 240 RKKLSDQGES RTEKSEGSNE VATDLELKTP GSASEQDVSP GQTSRKLSRK DNSLTDGSSS 300 SRCSSSHSVQ AISSNSVVRG TKDR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019265193.1	0.0	PREDICTED: transcription factor bHLH121-like
Swissprot	Q9LT23	1e-91	BH121_ARATH; Transcription factor bHLH121
TrEMBL	A0A1S4CT79	0.0	A0A1S4CT79_TOBAC; transcription factor bHLH121-like
TrEMBL	A0A1U7X8A6	0.0	A0A1U7X8A6_NICSY; transcription factor bHLH121-like
TrEMBL	A0A314L303	0.0	A0A314L303_NICAT; Transcription factor bhlh121 (Fragment)
STRING	XP_009783164.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5456	24	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	2e-86	bHLH family protein

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Min JH, et al. Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element. Front Plant Sci, 2017. 8: p. 2100 [PMID:29321786]