PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00665g06005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 235aa    MW: 27066.8 Da    PI: 7.5301
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00665g06005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM90.72.5e-28361563128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                                GfrFhPtd el+ +yL   v +k+l++   i + d+y++ePw +  k +++ek +yfF++ +kk+++++r  r++ +g Wk++ 
  Peinf101Scf00665g06005.1  36 EGFRFHPTDLELL-KYLLTFVLDKPLSELVPIGQEDLYSIEPWVIF-K-DKTEKTLYFFTELKKKKTENTRFVRSVGKGSWKSQD 117
                               7************.99*********999778**************6.3.3457899***************************** PP

                       NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               k k+v+++kg+++g k++L + +  +p+    +W+m+ey+l
  Peinf101Scf00665g06005.1 118 KGKAVCTEKGSVMGYKRSLRYQNSGSPH--DGQWLMKEYSL 156
                               *********************9655555..89*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-2829184IPR003441NAC domain
PROSITE profilePS5100528.86934184IPR003441NAC domain
PfamPF023651.5E-1636156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MFDCNVEATQ DVEENVLCTD NSARAELCMQ NSAHTEGFRF HPTDLELLKY LLTFVLDKPL  60
SELVPIGQED LYSIEPWVIF KDKTEKTLYF FTELKKKKTE NTRFVRSVGK GSWKSQDKGK  120
AVCTEKGSVM GYKRSLRYQN SGSPHDGQWL MKEYSLCDGV KKYLHERVRG YDKDNVVLCR  180
IKRKVAKDGP IAQKETIEDE ELDVIIESDH SSANHVAKLP MRKLFAHSND RQLHG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-14201846168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009589539.21e-106PREDICTED: NAC domain-containing protein 78-like
RefseqXP_016474024.11e-106PREDICTED: NAC domain-containing protein 78-like
RefseqXP_019251015.11e-104PREDICTED: NAC domain-containing protein 48-like
TrEMBLA0A1S4ABN41e-104A0A1S4ABN4_TOBAC; NAC domain-containing protein 78-like
STRINGXP_009589539.11e-105(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.16e-21NAC domain containing protein 96