PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00675g05002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 256aa    MW: 28581.8 Da    PI: 8.9915
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00675g05002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.000288110123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C++C + F ++  L  H++ H
  Peinf101Scf00675g05002.1  88 FSCNYCQRKFYSSQALGGHQNAH 110
                               89*****************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.52E-685115No hitNo description
PROSITE profilePS5015711.42788115IPR007087Zinc finger, C2H2
PROSITE patternPS00028090110IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MVTLNRDCQL EDLSSSSSSS CQETSLRYTK DNSTSDERNH LKEGEDEHGN VIRQKNNQEL  60
NLLERLNTIS PVCKEGTSSD SGVEPRVFSC NYCQRKFYSS QALGGHQNAH KRERTIAKRV  120
AGQRHLFNFT PAAAAAFGHH KYYGANSMAT LPLHGANSYH MNSLGIQAHS MIHKTTTPSP  180
FAVNSSGYWS SRQFINHQPA VGKLPYIPNK GNVHLIPHNP SFSTLQRIQV ENQEINGDVK  240
CKNTSDSQKI DLSLRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019262888.11e-75PREDICTED: zinc finger protein 1-like
TrEMBLA0A314L7G53e-74A0A314L7G5_NICAT; Zinc finger protein 1
STRINGXP_009767947.18e-72(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1573967
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.11e-36zinc-finger protein 1