PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00681g00004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 148aa    MW: 17313.2 Da    PI: 4.2031
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00681g00004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding249.3e-08836129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              rg+WT++Ed++lv +vk++G ++W+  a+
  Peinf101Scf00681g00004.1  8 RGPWTEQEDLQLVFYVKLFGDRRWDFLAK 36
                              89**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.911336IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.9E-7336IPR009057Homeodomain-like
SuperFamilySSF466891.08E-6437IPR009057Homeodomain-like
PfamPF002496.5E-6836IPR001005SANT/Myb domain
CDDcd001675.88E-41037No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MVQEEVRRGP WTEQEDLQLV FYVKLFGDRR WDFLAKVSEN ETNFYDTGGL ELLQSADGQK  60
KVSGHEKGES MKVYSMDEIW KDIELSEEND TITSNKLPVM ANVSPLWDYC PGSLWISDEE  120
ESKMFPPFSE HVDDHLQVYS FDKTNRTF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006366918.11e-27PREDICTED: transcription factor MYB48-like
RefseqXP_027773184.12e-28transcription factor MYB48-like
TrEMBLA0A4D9BXC55e-40A0A4D9BXC5_SALSN; Myb proto-oncogene protein, plant
STRINGPGSC0003DMT4000282311e-27(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1619035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.34e-15myb domain protein 59