PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00710g02016.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

G2-like

Protein Properties

Length: 89aa MW: 10071 Da PI: 10.2186

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00710g02016.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83	3.2e-26	21	71	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+rl+Wt+eLH+ F +av+qLGG+e+AtPk il++m+++ Lt+ hvkSHLQ Peinf101Scf00710g02016.1 21 KERLKWTQELHDLFEKAVSQLGGPERATPKGILKVMGIPALTIFHVKSHLQ 71 68************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.7E-14	18	72	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.6E-23	19	71	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.9E-21	21	72	IPR006447	Myb domain, plants
Pfam	PF00249	3.5E-8	23	71	IPR001005	SANT/Myb domain
PROSITE pattern	PS01016	0	50	70	IPR017860	Peptidase M22, conserved site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 89 aa Download sequence Send to blast
MPGKFREMPN MGSNRLDCSS KERLKWTQEL HDLFEKAVSQ LGGPERATPK GILKVMGIPA 60 LTIFHVKSHL QVSLLSFVMI LLLVYNSIF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-19	21	71	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-19	21	71	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-19	21	71	1	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-19	21	71	1	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-19	21	71	1	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-19	21	71	1	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-19	21	71	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-19	21	71	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-19	21	71	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-19	21	71	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-19	21	71	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-19	21	71	2	52	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015159989.1	8e-42	PREDICTED: protein PHR1-LIKE 1-like
Refseq	XP_016541335.1	7e-41	PREDICTED: protein PHR1-LIKE 1-like
Swissprot	Q9SJW0	2e-21	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A1U8EDD5	1e-39	A0A1U8EDD5_CAPAN; protein PHR1-LIKE 1-like
TrEMBL	A0A2G2VZ04	9e-41	A0A2G2VZ04_CAPBA; Protein PHR1-LIKE 1 (Fragment)
TrEMBL	A0A2G2YSD3	9e-41	A0A2G2YSD3_CAPAN; Uncharacterized protein (Fragment)
STRING	Solyc09g005370.1.1	8e-39	(Solanum lycopersicum)
STRING	XP_009799173.1	1e-37	(Nicotiana sylvestris)
STRING	XP_009588984.1	1e-37	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10101	20	26

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	9e-24	G2-like family protein