PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00777g03023.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 450aa    MW: 51290.7 Da    PI: 5.9992
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00777g03023.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM135.92.6e-42571842128
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                               ppG+rF Ptd elv++yL++++++ +l+  + i e++iy+++P  + +  + ++eek wy  ++rd+ky++gkr+nra+ +gyWk
  Peinf101Scf00777g03023.1  57 PPGYRFLPTDVELVKHYLRNRLDNLNLPP-NRIYEMNIYQYNPDAIAAnfRPSTEEKMWYILTPRDRKYKKGKRPNRAAGDGYWK 140
                               9*************************999.77**************84346667889**************************** PP

                       NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               atg dke+++k+g l+glkk Lvfy g++pkgektdW+mheyr+
  Peinf101Scf00777g03023.1 141 ATGADKEIKDKGGDLIGLKKALVFYIGKSPKGEKTDWIMHEYRA 184
                               ******************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.18E-4952211IPR003441NAC domain
PROSITE profilePS5100549.75456211IPR003441NAC domain
PfamPF023652.9E-2357183IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MENHQSIPTN NAIISARNLS SRHINEQLIS TPVPSNKFSN GDSITQQEID AYFNSFPPGY  60
RFLPTDVELV KHYLRNRLDN LNLPPNRIYE MNIYQYNPDA IAANFRPSTE EKMWYILTPR  120
DRKYKKGKRP NRAAGDGYWK ATGADKEIKD KGGDLIGLKK ALVFYIGKSP KGEKTDWIMH  180
EYRAPDVQYS AARDVDDWRL DDWVLCSIYK KSERDNTMFH QRKRTRDEYN VSVEEGDEQV  240
RESSNENISS GLANTFEGGE DSIRHESTNG NMSIQDSIDK LHSNNPTSIH PQVPTRYGNF  300
PHKFPTFDNL QWPSASIDHN YQSGLPAVTS TPQACSSNFN HHEYILTNYN LHPPSPMKIE  360
PISSMIGASS LVGQYRMEEE EFGQPCFSSC IGGWRGLENH DFVGLGNDEL AYDYVDRYLV  420
NAESSTSNNS ITPPPKPVNS DKQDCEKVHC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-45412111165NO APICAL MERISTEM PROTEIN
1ut4_B8e-45412111165NO APICAL MERISTEM PROTEIN
1ut7_A8e-45412111165NO APICAL MERISTEM PROTEIN
1ut7_B8e-45412111165NO APICAL MERISTEM PROTEIN
4dul_A8e-45412111165NAC domain-containing protein 19
4dul_B8e-45412111165NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009793862.11e-142PREDICTED: NAC domain-containing protein 102-like
TrEMBLA0A314KWZ21e-143A0A314KWZ2_NICAT; Nac transcription factor 25
STRINGXP_009626689.11e-144(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA139361213
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-36NAC family protein