PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00784g06008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 237aa    MW: 26957.9 Da    PI: 4.8481
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00784g06008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.92.6e-121010739128
                       NAM  39 iykvePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy....kgrapk 115
                                 + ePw++ +++k+    +++  y  ++ +k +a +k+ +r++ +g+Wk + + kev +++g+lvg  k+L +       ++++
  Peinf101Scf00784g06008.1  10 FSQKEPWQIFEACKShdciNKNARYIITQLKKVKADKKNVSRTVGRGTWKPQDSGKEVRDTNGTLVGFVKSLKYIpskkPSSTNN 94 
                               66789****743333234455677***************************************************5432223444 PP

                       NAM 116 gektdWvmheyrl 128
                                ++ +W+m ey+l
  Peinf101Scf00784g06008.1  95 NNNGEWLMREYSL 107
                               55889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.751130IPR003441NAC domain
SuperFamilySSF1019418.11E-1812130IPR003441NAC domain
PfamPF023659.1E-614107IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MAVHSQTKRF SQKEPWQIFE ACKSHDCINK NARYIITQLK KVKADKKNVS RTVGRGTWKP  60
QDSGKEVRDT NGTLVGFVKS LKYIPSKKPS STNNNNNGEW LMREYSLADK YLDASQVKNK  120
GFVICRIKKK EKKGNNIQEV INNDGDVEDD VQEYINSVLE EDHVQEDVNG QSNDTVLLAD  180
HIEENNNNEY CMIEGDDYVS VFDLLGSEDQ AQIQDHPLPS EWGSADDVDL KTLLDCL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019238684.16e-59PREDICTED: NAC domain-containing protein 30-like
TrEMBLA0A1J6JUZ12e-52A0A1J6JUZ1_NICAT; Nac domain-containing protein 43
STRINGXP_009598748.14e-52(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.13e-09NAC domain containing protein 2