PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00793g12004.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 137aa    MW: 15953 Da    PI: 8.0729
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00793g12004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1896.5e-2811100191
                      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                               ++YneYA  +GFsvr+++ +k++ +g +++r+++C+keg+r+++k++   ++++r+etrtgC a++ v+++++g++++++le+eH
  Peinf101Scf00793g12004.1  11 DYYNEYAVAIGFSVRNEYANKNRVQGYVISRKLTCYKEGYRDKDKRD-AATQKHRKETRTGCLAHIIVSRQSNGRFCIISLEEEH 94 
                               69******************************************999.9999********************************* PP

                      FAR1  86 nHelap 91 
                               nH+l+p
  Peinf101Scf00793g12004.1  95 NHPLVP 100
                               ****86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.0E-2511100IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MEFDSEEHAY DYYNEYAVAI GFSVRNEYAN KNRVQGYVIS RKLTCYKEGY RDKDKRDAAT  60
QKHRKETRTG CLAHIIVSRQ SNGRFCIISL EEEHNHPLVP SSLAHMLPPQ RKIKVAQAYE  120
IDLLDDSGIR LKIVYDI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016463957.12e-72PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_018631664.19e-75PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A1S3ZI806e-71A0A1S3ZI80_TOBAC; protein FAR1-RELATED SEQUENCE 5-like
STRINGXP_009619707.14e-72(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30211740
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.27e-24FAR1 family protein