PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00811g00011.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 251aa    MW: 28543.9 Da    PI: 8.9852
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00811g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.64.4e-08158200754
                               HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++ r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Peinf101Scf00811g00011.1 158 IAARHRRERISEKMRVLQRLVPGG-----TKMDTASMLDEAIHYMKFL 200
                               56799*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.818151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-13157206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.65E-11157205No hitNo description
Gene3DG3DSA:4.10.280.103.3E-13158209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-5159200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-14160223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010500Biological Processtransmitting tissue development
GO:0048462Biological Processcarpel formation
GO:0080126Biological Processovary septum development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDIDLFKSIN SEDQMEMMVM MHMNEMPIME FSPQGMISNS TNNLPQIIHD HNSPTFLNIP  60
STNISFTNSS TLVHDQESSI TLPFLENSIS TTSDYKEQVS LTSHLTFPSM TTKRNNSMGA  120
MREMIFKIAA MQPIHIDPES IKPPKRKNVK ISNDPQSIAA RHRRERISEK MRVLQRLVPG  180
GTKMDTASML DEAIHYMKFL KKQVQNLEKA RPVASAGFLG FPVPMSLSGN NYNLPMGTRT  240
YHQPYHQCIQ P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755242e-59HG975524.1 Solanum lycopersicum chromosome ch12, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009766851.15e-87PREDICTED: transcription factor HEC2-like
RefseqXP_016456456.15e-87PREDICTED: transcription factor HEC2-like
RefseqXP_016549968.15e-87PREDICTED: transcription factor HEC1-like
RefseqXP_019257960.15e-87PREDICTED: transcription factor HEC2-like
TrEMBLA0A2G2VHJ68e-86A0A2G2VHJ6_CAPBA; Transcription factor HEC2
STRINGXP_009766851.12e-86(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75223101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-47bHLH family protein