PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00835g04008.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 282aa    MW: 32604.4 Da    PI: 8.5719
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00835g04008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.31.5e-23111323127
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP.wdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                               +G rFhPtd el+  yLkk ++g++++ +  i+  +iy  +P +++   ++++++  yfF++ +kk+++ kr  r+  +g+Wka+
  Peinf101Scf00835g04008.1  11 MGERFHPTDVELI-SYLKKFLKGEPISSKCPIQAGEIYGEQPpRQI-FGASHRHNVRYFFTPLKKKKKHHKRFIRTCGNGTWKAQ 93 
                               699**********.9************9767*******88761555.4556667788**************************** PP

                       NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                                   +++s k+ +vg k+++v+ + ++p+ ++  W+m+ey 
  Peinf101Scf00835g04008.1  94 TCGDPIKS-KEIVVGFKRSFVYENTQEPT-QHKGWLMKEYF 132
                               *******9.999**********9777776.8899******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.8649157IPR003441NAC domain
SuperFamilySSF1019413.92E-2611156IPR003441NAC domain
PfamPF023654.9E-1512131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MSSSIPQFHI MGERFHPTDV ELISYLKKFL KGEPISSKCP IQAGEIYGEQ PPRQIFGASH  60
RHNVRYFFTP LKKKKKHHKR FIRTCGNGTW KAQTCGDPIK SKEIVVGFKR SFVYENTQEP  120
TQHKGWLMKE YFVADDFFRE NNIPKEDDFV ICRIKKNTKE KSVEDEDVST VLVEEDVKYI  180
IRDMLHGPYD NCTTRSVQPA TLCQHQVLKE ADHNGFIINR VPEQASTEVP HSESMVTEDK  240
NTTLTTFELK LMVNQLSLLG SSKVVEWIII NTQVSLTNLL KR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-131216118174Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019241184.11e-67PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1J6KCJ03e-66A0A1J6KCJ0_NICAT; Nac domain-containing protein 78
STRINGXP_009789986.11e-65(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-15NAC-like, activated by AP3/PI