PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00861g03022.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 531aa    MW: 60028.8 Da    PI: 6.1763
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00861g03022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.86.2e-5161281123
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                               lppGfrFhPtdeelv +yL++k+++kk+el evi+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyW
  Peinf101Scf00861g03022.1   6 LPPGFRFHPTDEELVAYYLNRKINNKKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYW 89 
                               79****************************.99***************6434555777*************************** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvm 123
                               katgkd++v s + + vg+kktLv+y+grap+g +tdW +
  Peinf101Scf00861g03022.1  90 KATGKDRKVNS-QMRSVGMKKTLVYYRGRAPHGARTDWNL 128
                               ***********.9999**********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-524128IPR003441NAC domain
PROSITE profilePS5100548.7826155IPR003441NAC domain
PfamPF023654.0E-247127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    Send to blast
MAPVALPPGF RFHPTDEELV AYYLNRKINN KKIELEVIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRSVGMKKT LVYYRGRAPH  120
GARTDWNLNI GPKIGDHYAS AASDRSSGNI DLYSEGRSDH DMENSHHDQY AMPLSSATCS  180
SSRASHGSPI NNVAISSHDD DKWMQYLSDE AFSFNNQLIP NYGTLQYHPS KVDIALECAR  240
LQHRFTLPPL EIQDFPQVGC VDSKMPQSSF IHQTTNQTGI LEEILSVAEA SQNLMNQDSW  300
GGNNCAPIDD FSFQPHNDQT HDLGSFHFME QLKGDQNVRA IAIGDADHED FKSDRIVENL  360
RWIGMSDRDL EKTSLEDYKT VPVENVSAIE REDNIELPGE ISGHHNSFNG LNETEANNYS  420
MGNNFLGDGD GDGFVYGKIE VSHGVFIATG QSSKTFYHQV TPSRTLRLVK VNDFPIYNIG  480
NSDSRKIPKD KTFLDNFLAF SRKMLGSKEG KYYNVAHMEK KWPYLTLVAA L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-49212611133Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2265096e-58AC226509.1 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0144P17, complete sequence.
GenBankHG9755146e-58HG975514.1 Solanum lycopersicum chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019265207.10.0PREDICTED: NAC domain-containing protein 86-like
TrEMBLA0A314L4810.0A0A314L481_NICAT; Nac domain-containing protein 45
STRINGXP_009790763.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-114NAC domain containing protein 28