PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00879g16003.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

NAC

Protein Properties

Length: 225aa MW: 25912.4 Da PI: 6.9475

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00879g16003.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.7	4.3e-31	9	87	52	129
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 k +++ewyfFs rd+kyatg r+nrat sgyWkatgkd++vl+ +++ vg++ktLvfyk+rap+g kt W+mhe+rle Peinf101Scf00879g16003.1 9 KLNSREWYFFSFRDRKYATGFRTNRATISGYWKATGKDRTVLDPqTRAIVGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 87 44678************************************856667*************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	38.951	1	105	IPR003441	NAC domain
SuperFamily	SSF101941	3.79E-37	7	105	IPR003441	NAC domain
Pfam	PF02365	7.0E-15	14	86	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence Send to blast
MFVKLEVAKL NSREWYFFSF RDRKYATGFR TNRATISGYW KATGKDRTVL DPQTRAIVGM 60 RKTLVFYKNR APNGIKTGWI MHEFRLENPL IPPKEDWVLC RVFDKAKCEN MSSSNILSPQ 120 ILYEAADLAI SPPNIDHHAL SYGGYRPTPA AAVLSRNFFD VLESHDNQRN YLQLSQEMNK 180 APLNVMAEDD EYGFLLDMNN FEVPSLQDVG PGNIRFEDDN SLVFI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-27	8	105	66	165	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-27	8	105	66	165	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-27	8	105	66	165	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-27	8	105	66	165	NO APICAL MERISTEM PROTEIN
3swm_A	2e-27	8	105	69	168	NAC domain-containing protein 19
3swm_B	2e-27	8	105	69	168	NAC domain-containing protein 19
3swm_C	2e-27	8	105	69	168	NAC domain-containing protein 19
3swm_D	2e-27	8	105	69	168	NAC domain-containing protein 19
3swp_A	2e-27	8	105	69	168	NAC domain-containing protein 19
3swp_B	2e-27	8	105	69	168	NAC domain-containing protein 19
3swp_C	2e-27	8	105	69	168	NAC domain-containing protein 19
3swp_D	2e-27	8	105	69	168	NAC domain-containing protein 19
4dul_A	1e-27	8	105	66	165	NAC domain-containing protein 19
4dul_B	1e-27	8	105	66	165	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009800923.1	1e-107	PREDICTED: NAC domain-containing protein 21/22-like
Refseq	XP_016469611.1	1e-107	PREDICTED: NAC domain-containing protein 21/22-like
TrEMBL	A0A1S3ZZ69	1e-105	A0A1S3ZZ69_TOBAC; NAC domain-containing protein 21/22-like
TrEMBL	A0A1U7YCR1	1e-105	A0A1U7YCR1_NICSY; NAC domain-containing protein 21/22-like
STRING	XP_009800923.1	1e-106	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1882	24	66

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	3e-63	NAC domain containing protein 74