PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00887g05031.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 316aa    MW: 35256.1 Da    PI: 10.0318
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00887g05031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.97.8e-32244301359
                               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  Peinf101Scf00887g05031.1 244 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 301
                               99************************988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105338.5E-19194240IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.806.9E-34230302IPR003657WRKY domain
PROSITE profilePS5081130.549237303IPR003657WRKY domain
SuperFamilySSF1182902.88E-27239302IPR003657WRKY domain
SMARTSM007741.9E-38242302IPR003657WRKY domain
PfamPF031062.7E-27244300IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MAVELMMDYT NSRNCTYVTK LEEKSVVQEA ASGLESVEKL IRLLSQTQSQ QIQQQNKSSP  60
MEIEKVADAA VTKFKKVISL LDRNRTGHAR FRKAPVIQQN YVDTKVYSPT PIQQVPLISY  120
EHYNSQVLPM VPKTISFTYS PEMSRTNSFN ISTVTGETES KQQHSSSSAF QITNLSSQVS  180
NSAGKPPLSS SSLKRKCSLS ENAVSGKCSG SSGRCHCSKR RKLRLKRVVR VPAISMKMAD  240
IPPDDYSWRK YGQKPIKGSP HPRGYYKCSS VRGCPARKHV ERALDDPTML IVTYEGEHNH  300
SQLSVAETSS LILESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-21230301272WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY1570639e-62AY157063.1 Lycopersicon esculentum WRKY transcription factor IId-4 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608534.10.0PREDICTED: probable WRKY transcription factor 7
RefseqXP_016498573.10.0PREDICTED: probable WRKY transcription factor 7
SwissprotQ9STX01e-93WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A0V0HVF20.0A0A0V0HVF2_SOLCH; Putative WRKY transcription factor 15-like
STRINGXP_009608534.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.11e-76WRKY DNA-binding protein 15