PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00889g00022.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 338aa    MW: 37396.3 Da    PI: 5.1147
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00889g00022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix87.21.9e-2732123186
                  trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                               rWt+qe+l+Li+++r  e+r+rrg+         + +p+W++vs++++++g++r+p+qC+++w+nl+++ykkike+e+ +   ++
  Peinf101Scf00889g00022.1  32 RWTRQEILVLIQGKRVAESRVRRGRtggvefgsgQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESHE---TE 113
                               8**********************97777888888********************************************85...44 PP

                  trihelix  77 stcpyfdqle 86 
                               s +++ ++l+
  Peinf101Scf00889g00022.1 114 SFWVMRNDLR 123
                               5688888775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.3E-1232117No hitNo description
PROSITE profilePS500906.43298IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.607.5E-53297IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050777Biological Processnegative regulation of immune response
GO:0071219Biological Processcellular response to molecule of bacterial origin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MALEPLTDGD SNGRQQSVNG GDDGSKAPRL PRWTRQEILV LIQGKRVAES RVRRGRTGGV  60
EFGSGQVEPK WASVSSYCKR HGVNRGPVQC RKRWSNLAGD YKKIKEWESH ETESFWVMRN  120
DLRRERKLPG FFDREVYDIL DGRGTTGEDM PPAGLALALG PAATATEEEA LFDSGRTAAT  180
ATEEEALFDS GRTAAADEGL FSDFEQSVQE EAGVQPTKEA PIPAPTPISE QQYRPFSLES  240
PAPGTSDQKQ QTSDPDIGST REGKKRKRDV TDTDEEPDNL QHQLVKALER NGNLLSSQLE  300
AQNAHYQLDR EQRKDHVNSL VGVLNKLADA LGRIADKL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00288DAPTransfer from AT2G33550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009791337.11e-170PREDICTED: uncharacterized protein LOC104238623 isoform X1
RefseqXP_016472490.11e-170PREDICTED: trihelix transcription factor ASR3-like
SwissprotQ8VZ201e-106ASR3_ARATH; Trihelix transcription factor ASR3
TrEMBLA0A1S4A7851e-169A0A1S4A785_TOBAC; trihelix transcription factor ASR3-like
TrEMBLA0A1U7XGZ11e-169A0A1U7XGZ1_NICSY; uncharacterized protein LOC104238623 isoform X1
STRINGXP_009791337.11e-169(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17862460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-104Trihelix family protein
Publications ? help Back to Top
  1. Vidal EA, et al.
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.
    BMC Genomics, 2013. 14: p. 701
    [PMID:24119003]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]