PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00889g03041.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 159aa    MW: 18148.2 Da    PI: 9.5071
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00889g03041.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY352.8e-1198119122
                               ---SS-EEEEEEE--TT-SS-E CS
                      WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                               ldDgy+WrKYGqK vk+++fpr
  Peinf101Scf00889g03041.1  98 LDDGYRWRKYGQKAVKNNRFPR 119
                               59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-1283119IPR003657WRKY domain
SuperFamilySSF1182907.72E-1490139IPR003657WRKY domain
PROSITE profilePS5081113.51793140IPR003657WRKY domain
SMARTSM007742.0E-1298139IPR003657WRKY domain
PfamPF031061.7E-799119IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MENYSHIFPS SSSHNNSHAK SELGQEDKKV PNGFLGLMAS MEQTPSSDMN SGVTQSNNNS  60
FSNYSMEQNE VKSCKKKGEK KIKKPRYAFQ TRSQVDILDD GYRWRKYGQK AVKNNRFPRL  120
SKDEGVVVTT YEGMHSHPIE KSTDNFEHIL SQMQIYASV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-1488137774Probable WRKY transcription factor 4
2lex_A4e-1488137774Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754444e-50HG975444.1 Solanum pennellii chromosome ch05, complete genome.
GenBankHG9755174e-50HG975517.1 Solanum lycopersicum chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615508.12e-67PREDICTED: probable WRKY transcription factor 75
RefseqXP_016446514.12e-67PREDICTED: probable WRKY transcription factor 75
TrEMBLA0A1S3Y3035e-66A0A1S3Y303_TOBAC; probable WRKY transcription factor 75
STRINGXP_009615508.18e-67(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22042461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-41WRKY DNA-binding protein 75