PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00896g02007.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

HD-ZIP

Protein Properties

Length: 190aa MW: 22200.7 Da PI: 5.9184

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00896g02007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.3	2.7e-18	31	85	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +f++eq++ Le++Fe++ ++ +++ ++Ak+lgL+ rqV +WF N+Ra++k Peinf101Scf00896g02007.1 31 KNKNRFSDEQIKSLETMFESKTKLEPRKKLQIAKELGLEPRQVAIWFLNKRARYK 85 56789*************************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.4E-17	10	88	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.42E-18	13	89	IPR009057	Homeodomain-like
PROSITE profile	PS50071	17.038	27	87	IPR001356	Homeobox domain
SMART	SM00389	1.2E-13	29	91	IPR001356	Homeobox domain
CDD	cd00086	3.95E-12	31	88	No hit	No description
Pfam	PF00046	1.1E-15	31	85	IPR001356	Homeobox domain
PROSITE pattern	PS00027	0	62	85	IPR017970	Homeobox, conserved site
Pfam	PF02183	2.1E-11	87	121	IPR003106	Leucine zipper, homeobox-associated

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence Send to blast
MFDGGEYFSS SAECFSVSSF SSSSSRKRKI KNKNRFSDEQ IKSLETMFES KTKLEPRKKL 60 QIAKELGLEP RQVAIWFLNK RARYKSKQLE KDYNILVSNY KNLSSQYESL KKEKQSLVMQ 120 SQKNEQCCKQ EFGEIDIDSR SDNRDNKNQM NEKSLSFDLS DHEIGEISDD DSSIKTDYFG 180 VDEDHDFLNM

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269\|PubMed:15604708, ECO:0000269\|PubMed:8771791}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269\|PubMed:16055682, ECO:0000269\|PubMed:8771791}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019226444.1	4e-62	PREDICTED: homeobox-leucine zipper protein ATHB-12-like
Swissprot	P46897	5e-46	ATHB7_ARATH; Homeobox-leucine zipper protein ATHB-7
TrEMBL	A0A314KRV9	1e-60	A0A314KRV9_NICAT; Homeobox-leucine zipper protein athb-7
STRING	Gorai.007G111400.1	4e-60	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2041	23	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.2	4e-46	homeobox 7

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792]