PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00901g02009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 137aa    MW: 15853.7 Da    PI: 5.2519
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00901g02009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.9e-081442129
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                              +g WT+eEd +l  +v+++G  +W+  ++
  Peinf101Scf00901g02009.1 14 KGTWTPEEDRKLTAYVTRYGCWNWRQLPN 42
                              799*****************889987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-10647IPR009057Homeodomain-like
PROSITE profilePS500906.853947IPR017877Myb-like domain
SuperFamilySSF466895.1E-8946IPR009057Homeodomain-like
CDDcd001670.002361643No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MARTRCYDKS GLKKGTWTPE EDRKLTAYVT RYGCWNWRQL PNRKKRRENG TQISANSNIP  60
QLSPKQSCSE LSSCASVDQH VENMHAEREV FQEEYLFEES SLISFWTEPF LVDNFSTTSD  120
FFVPSLIDDG LVSPFSP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019246969.13e-32PREDICTED: myb-related protein Myb4-like
TrEMBLA0A1J6I9L98e-31A0A1J6I9L9_NICAT; Myb-related protein myb4
STRINGXP_009779987.12e-31(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.11e-12myb domain protein 16