PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00904g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 329aa    MW: 37189.8 Da    PI: 6.789
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00904g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.87.3e-5651301128
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                               lppGfrFhPtdeel+++yL++kv++ ++++ +++++vd++k+ePwdLp+k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+
  Peinf101Scf00904g00001.1   5 LPPGFRFHPTDEELITYYLTNKVSDFSFTA-RAVADVDLNKCEPWDLPAKASMGEKEWYFFSLKDRKYPTGLRTNRATEAGYWKT 88 
                               79*************************999.88***************999999******************************* PP

                       NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               tgkdke+++ +g lvg+kktLvfy+grapkgekt+Wvmheyr+
  Peinf101Scf00904g00001.1  89 TGKDKEIFR-GGVLVGMKKTLVFYRGRAPKGEKTNWVMHEYRM 130
                               *********.*******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-643151IPR003441NAC domain
PROSITE profilePS5100559.7295151IPR003441NAC domain
PfamPF023651.3E-286130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MEENLPPGFR FHPTDEELIT YYLTNKVSDF SFTARAVADV DLNKCEPWDL PAKASMGEKE  60
WYFFSLKDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRGGV LVGMKKTLVF YRGRAPKGEK  120
TNWVMHEYRM ETRLGFKPSK EEWVVCRVFQ KSSTVKKPQP TSSSQQSLDS PCDTNTIANE  180
LGDIELPINF NCLATPSSGI SNISLHNYND ENMNMNLNMN LAAATREVAA STLPLLPWPS  240
SLLSSNLSSV NSLLFLRALQ LRGYQPREAT TTTHDYSFMP QGISQYGNDF SSNFAANIGA  300
PSPSMVFDNS VQQQHEPHDQ SYKLDSNIW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-57415716171NO APICAL MERISTEM PROTEIN
1ut4_B6e-57415716171NO APICAL MERISTEM PROTEIN
1ut7_A6e-57415716171NO APICAL MERISTEM PROTEIN
1ut7_B6e-57415716171NO APICAL MERISTEM PROTEIN
3swm_A5e-57415719174NAC domain-containing protein 19
3swm_B5e-57415719174NAC domain-containing protein 19
3swm_C5e-57415719174NAC domain-containing protein 19
3swm_D5e-57415719174NAC domain-containing protein 19
3swp_A5e-57415719174NAC domain-containing protein 19
3swp_B5e-57415719174NAC domain-containing protein 19
3swp_C5e-57415719174NAC domain-containing protein 19
3swp_D5e-57415719174NAC domain-containing protein 19
4dul_A6e-57415716171NAC domain-containing protein 19
4dul_B6e-57415716171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00364DAPTransfer from AT3G18400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009620409.11e-168PREDICTED: NAC domain-containing protein 100
RefseqXP_016485595.11e-168PREDICTED: NAC domain-containing protein 100-like
TrEMBLA0A1S4B9J51e-167A0A1S4B9J5_TOBAC; NAC domain-containing protein 100-like
STRINGXP_009620409.11e-167(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15224279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-101NAC domain containing protein 58