PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00909g10005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family TCP
Protein Properties Length: 209aa    MW: 24331.3 Da    PI: 10.291
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00909g10005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP71.52.6e-2263105244
                       TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkd 44 
                               + k+drhski+T++g Rd RvRls+++a++fFdLqd+LGfdk+
  Peinf101Scf00909g10005.1  63 TRKTDRHSKICTAQGVRDQRVRLSLHIARKFFDLQDMLGFDKA 105
                               5799*************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.1E-2064105IPR005333Transcription factor, TCP
PROSITE profilePS5136920.11865123IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137010.583130147IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
QEDHLFFLNF PSPFLDDHEL PLSKTLPQQH QDLKYHQRRD INFAEAKISS KKRNLGTMPR  60
RRTRKTDRHS KICTAQGVRD QRVRLSLHIA RKFFDLQDML GFDKAISRRE ESSNNEVKDK  120
GKLREMVHKR ESRSKARARA GERTKEKMMV KGLEKCKEWH ETSPNNILDQ LGSSSNSGFL  180
DQESNSYNAC SVNQEKGSHI EANSQSIEH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF2742493e-67JF274249.1 Petunia x hybrida TCP1 gene, complete cds.
GenBankJQ4001043e-67JQ400104.1 Petunia x hybrida putative transcription factor (TCP1) mRNA, complete cds.
GenBankKR0021033e-67KR002103.1 Petunia x hybrida TCP transcription factor 1 (TCP1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574613.13e-79PREDICTED: transcription factor DICHOTOMA-like
TrEMBLA0A2G2WSB42e-79A0A2G2WSB4_CAPBA; Transcription factor TCP12
STRINGPGSC0003DMT4000193245e-77(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24362359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.14e-20TCP domain protein 12