PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00936g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 153aa    MW: 17320 Da    PI: 4.6844
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00936g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.42.2e-12441113098
                               ..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS
                        B3  30 keesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 
                               +++ + +tl++    +W++kl  +k   +  +++GW++Fv + gLkegD +vF+l   + ++ +++v++++
  Peinf101Scf00936g00001.1  44 PATAVPVTLRN-GQIEWNMKL--NKLCAKRRFSSGWSKFVTDTGLKEGDGLVFELLeCNnENVKFKVQILD 111
                               44445566666.5589*****..888777889**********************55476688888888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100172.47E-1234111No hitNo description
PfamPF023625.9E-1036111IPR003340B3 DNA binding domain
SuperFamilySSF1019362.35E-1139111IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.8E-1241111IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.32158113IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MMDIHYAVVD IKESTDNCGR AILEIQATIA RIEILPPKIL QHIPATAVPV TLRNGQIEWN  60
MKLNKLCAKR RFSSGWSKFV TDTGLKEGDG LVFELLECNN ENVKFKVQIL DGSFSEELLQ  120
ELDEGTSDNP VDILENWICL SRRLVPLISL SFF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18192154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-07B3 family protein