PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00959g07009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 238aa    MW: 26041.6 Da    PI: 9.9312
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00959g07009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.72.1e-086899435
                              HHHHHHHHHHHHHHHHHHHHHCTSCCC...TT CS
                       HLH  4 ahnerErrRRdriNsafeeLrellPkaskaps 35
                              +h ++Er+RR+riN  +++L++l P ++k+  
  Peinf101Scf00959g07009.1 68 THAMAERKRRERINAHLHTLKKLFPYLPKELR 99
                              79***********************9753333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.94E-85698IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.57E-56799No hitNo description
PfamPF000107.7E-668100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-668106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2602.2E-6154219No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MISSLQGCNG FLQRANSLQL LHHKKNGGGN GYKYYSSSNT MANNTTTTAA DENAKSTRKS  60
KSKDTAWTHA MAERKRRERI NAHLHTLKKL FPYLPKELRK KVAQQLETKR DDKGGCCSNN  120
EFSSLFLPSE TDEVAVSYCE GSSDTEGQLM VKATVCCEDR PGLNGHLSMA VSSVQGRVIK  180
AEMATVGGRT KAELVVVLCK ENGGERDIAQ LRRALRAVVE NRALGLGSSV VLGRRFGC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17277ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591424.11e-98PREDICTED: transcription factor bHLH30-like
TrEMBLA0A1S4CBR75e-96A0A1S4CBR7_TOBAC; transcription factor bHLH30-like
STRINGXP_009591424.15e-98(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137131315
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.14e-22bHLH family protein