PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00962g15028.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 209aa    MW: 23693 Da    PI: 4.3032
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00962g15028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.1e-091443130
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                              rg W++eEde+l+++++ +G g+W+ ++++
  Peinf101Scf00962g15028.1 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEK 43
                              788************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.3E-13643IPR009057Homeodomain-like
PROSITE profilePS500907.039943IPR017877Myb-like domain
SuperFamilySSF466895.68E-81043IPR009057Homeodomain-like
PfamPF002493.8E-71443IPR001005SANT/Myb domain
CDDcd001673.15E-61743No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAEIIFTQ DLGVTKSQLL  60
QDSALFTSPN PLFNFDSGNS LETMTNNAND RSTNASLFQE TSVLNSEFWQ VDLQQQVHTS  120
YTTGIHSNYL PPLLEMPHME VPSSNNNMMV EGQDHHQLNE WNMDTQQCCP SYLFWDQETG  180
TLGGDHEFVD PNNTSNNIGQ ILSSFPSSL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754475e-41HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006343934.13e-56PREDICTED: transcription factor MYB21
TrEMBLA0A1U7XM018e-51A0A1U7XM01_NICSY; transcription repressor MYB6-like
STRINGXP_009793072.11e-51(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA124391722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63910.12e-27myb domain protein 103