PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00962g23035.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 337aa    MW: 38214.2 Da    PI: 4.9687
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00962g23035.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.81.7e-111381752559
                               EEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY  25 YrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                +Ct++   +C+++k+v+rs++dp+++e tY+g+H+++
  Peinf101Scf00962g23035.1 138 RKCTYRlmqNCWATKQVQRSDDDPTLFELTYKGSHTCN 175
                               59**99999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182903.27E-12130176IPR003657WRKY domain
SMARTSM007748.3E-15131176IPR003657WRKY domain
PROSITE profilePS508118.8136177IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.4E-10138176IPR003657WRKY domain
PfamPF031062.1E-9139174IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MECGFNWEYN SLINELTQGM EHAKQLNAYL SSFENQELHV HMQMILSSYE KSLSILKWTG  60
SVTQTPQIVA PLVSTGAPES SISVDESPIS DDMNRSFQDH QERYASKKRK QLPTRCEQVR  120
VSAENGFEGP TDDGYSWRKC TYRLMQNCWA TKQVQRSDDD PTLFELTYKG SHTCNQAIHS  180
ATQPKSPEKH EFKKQASFSR MQSNQMLANL QANLRVNTND LDKNEATCSF QFSPTFSGFV  240
DENLHFQMSQ VDDNLVGGYS PSFVSPTTPE SNYFSVSSCQ MNGSRKVHSL NHSESDLPDL  300
FSANTSSTSS PIVGLEFPLE HVELDPNFPF DNLEFFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009613243.10.0PREDICTED: probable WRKY transcription factor 53
RefseqXP_018629757.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A1S4BZQ80.0A0A1S4BZQ8_TOBAC; probable WRKY transcription factor 41
TrEMBLA0A1U7X3Y60.0A0A1U7X3Y6_NICSY; probable WRKY transcription factor 41
STRINGXP_009613243.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.14e-46WRKY family protein