PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00974g18005.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 483aa    MW: 53519.6 Da    PI: 6.7748
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00974g18005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.99.7e-29227285259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dg++WrKYGqK  +g+++prsYYrC+ a  Cpv+k+v+r+ ed +v+++tYeg+Hnh+
  Peinf101Scf00974g18005.1 227 NDGCQWRKYGQKISRGNPCPRSYYRCSVApLCPVRKQVQRCVEDMSVLITTYEGTHNHS 285
                               8***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-30211287IPR003657WRKY domain
SuperFamilySSF1182901.83E-25218287IPR003657WRKY domain
PROSITE profilePS5081127.428221287IPR003657WRKY domain
SMARTSM007744.4E-34226286IPR003657WRKY domain
PfamPF031063.0E-25227284IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    Send to blast
MEKISENSIS KASECHNHEE TSPRKDLKDD EFKSAIEEVH EVRLENARLK MLLEQLEKDY  60
SSLQTRFFNI CQPDIKRSAT PTCTPESIEE EEHDLVSLRL GRSPSRNDTK KVDKKISYCK  120
TGEDHHFCDQ PNDGLKLGLD YRIEVSNSDL IKPNTVPISD IVEEPKAEDF RESGPISEVV  180
RPIRRGDNEV SQPSLNVKRV GDDEVSQPNV KRARVSVRTK CDYPTINDGC QWRKYGQKIS  240
RGNPCPRSYY RCSVAPLCPV RKQVQRCVED MSVLITTYEG THNHSLPIEA TAMASTTSAA  300
ASMLLSGSTS SQSAKDFTNL PNNSKTQPLY LSSSSTNPNP FPTITLDFTT FPTTSSFTSF  360
NFPSNFQSST GLPSNSLSFS SPESSTLSKI LGSAYVNYDT TSTLPYNKNL TNIGSSNLER  420
PPHAQKQFDQ PILGKNNTSS NKLKEVSSQQ ALTETLTKAI TSDPSFQNVL AAAISSMVGA  480
TKT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22213287174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009600779.10.0PREDICTED: probable WRKY transcription factor 72
TrEMBLA0A1S3WX580.0A0A1S3WX58_TOBAC; probable WRKY transcription factor 72
STRINGXP_009600779.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128051921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.16e-57WRKY DNA-binding protein 72