PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00990g00013.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 722aa    MW: 77611.7 Da    PI: 6.3143
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00990g00013.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.95.5e-16443489455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                hn  ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+k Lq
  Peinf101Scf00990g00013.1 443 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASMLDEAIEYLKTLQ 489
                               6*************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.53E-17435493No hitNo description
Gene3DG3DSA:4.10.280.101.5E-20436497IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-20436501IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.228439488IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-13443489IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-17445494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009704Biological Processde-etiolation
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    Send to blast
MVRGKLESGQ PKISAATPFP ENDVVELVWE NGQIMMQGQS SSAKKSPTSN NLPSISPRDQ  60
DRYMGNSSTS KIGKFGVMDS MLNDMPSVPA GELDLLQEDE GVPWLGYSEQ QDYCAQLLPE  120
ISGMTENEPS RQNEFVLMDK RGSTDQVIGD SHSVPSHNAM NYEQRNTSKV SPSSRFSLLS  180
SLVPQKGHTS TLSLEPGVSD IFSSRTSYNP VSVFGDSSPS QASAGDVRSI TIRKQNMPES  240
SSGLLNFSHF SRPATFVKAA KLPNSAGGLN VSGSSTFEEK GIREGENVTN SNNNVSAASV  300
ENFLSSKKEN HYPTNVVSSQ LESRASGASF HDRSCPVEQS DVYTDCSKNN DNTPAQLTGA  360
KATKDIANGE RNVEHGVACS SVCSGSSAER GSSDQPHNLK RKTRDIEESG SRSEDIEEES  420
VGIKKACPTR GGTGSKRSRA AEVHNLSERR RRDRINEKMR ALQELIPNCN KADKASMLDE  480
AIEYLKTLQL QVQIMSMGAG MCVPPMMFPT GVQHMHATQM RHFSPMGLGM GMGMGMGFGM  540
GMLEMNGRSS GCPIFPMPPF QGAHFPSPPI PASTAYPGTA GSNPHAFAHP GQGLPMPIPR  600
ASRAPLAGQL STGSAVSLNV PRAGVPVDML SAPPILDSKN PVNKKNSKIE HNVEPSCPIN  660
QTCSQVQATN EVLEKSASLQ KNDQLPDVTD SAANNLTNQI DVPVSEAGEY RLDKTCDIQL  720
IQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1447452ERRRRD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00081ChIP-seqTransfer from AT1G09530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006358519.10.0PREDICTED: transcription factor PIF3-like
RefseqXP_015169448.10.0PREDICTED: transcription factor PIF3-like
TrEMBLM1BK410.0M1BK41_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000470790.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49652437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.23e-47phytochrome interacting factor 3