PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00990g01012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 247aa    MW: 28208.1 Da    PI: 6.6241
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00990g01012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.83.2e-101444131
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                              +g W++eEde+lv+ ++++G g+W+++++  
  Peinf101Scf00990g01012.1 14 KGLWSPEEDEKLVKHITKYGHGCWSSVPKLA 44
                              678************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-14643IPR009057Homeodomain-like
SuperFamilySSF466892.94E-8744IPR009057Homeodomain-like
PROSITE profilePS5129411.415954IPR017930Myb domain
PfamPF002492.9E-71443IPR001005SANT/Myb domain
CDDcd001671.64E-61742No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MGRHSCCYKQ KLRKGLWSPE EDEKLVKHIT KYGHGCWSSV PKLADSNDQL NFIEAHESIS  60
KHIGIATEKS STLSTMTNNM DRYPLIHETN NIVPPTHEFF TKSPHDLASY FSFQQLNNYS  120
PNSIGLSMTN SNTNNLIFNN STNSKNSHDM VSDQFNSCTM ASDPEEIKWS EYMQTPYLLS  180
ANHHQMSQHQ DLYGEAKSEA QFITQGSLNL SNTTWLHQSQ HEQSSLQTAD LYNKNFQRLP  240
AAYGQYS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.25e-25myb domain protein 55