PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01026g08007.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Dof

Protein Properties

Length: 214aa MW: 23951.8 Da PI: 9.3002

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01026g08007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.7	1.1e-37	11	69	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +++ lkcprC+s ntkfCyynnyslsqPr+fCk+C+ryWt GG+lrnvPvGgg+rk +k Peinf101Scf01026g08007.1 11 QQQRLKCPRCESWNTKFCYYNNYSLSQPRHFCKGCKRYWTSGGTLRNVPVGGGCRKINK 69 68999**************************************************9765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-25	9	70	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.2E-32	13	69	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.341	15	69	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	17	53	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence Send to blast
MEKFTSQDQQ QQQRLKCPRC ESWNTKFCYY NNYSLSQPRH FCKGCKRYWT SGGTLRNVPV 60 GGGCRKINKR IKKPSTTSST STNHSNTLTP SISTTNTNPS HHIHQAQNDT ISPLLYGLLP 120 TYPSNLKFPF PRLFNNSENC NIDTISGLGF VQDFGTANSS SLSSSNSICG SSTLASLIAS 180 NPQQHNFRGL MSSYEDLEIP GRHTFCLFSL PPFY

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009767955.1	1e-49	PREDICTED: dof zinc finger protein DOF1.4-like
Refseq	XP_028077062.1	2e-49	dof zinc finger protein DOF1.4-like
Swissprot	O82155	6e-32	DOF17_ARATH; Dof zinc finger protein DOF1.7
TrEMBL	A0A1U7W121	2e-48	A0A1U7W121_NICSY; dof zinc finger protein DOF1.4-like
TrEMBL	A0A3Q8TD73	3e-48	A0A3Q8TD73_DIOKA; Transcription factor Dof4
STRING	XP_009767955.1	4e-49	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	5e-33	Dof family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]